Information for 3-GTGGCTAGCACAATGC (Motif 11)

A T C G C G A T A C T G A C T G A T G C C A G T C G T A A C T G A T G C C G T A A G T C C G T A C T G A A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C G T C A A G C T C G A T A C T G A C G T A T C G G T A C A C G T G T C A A T C G A G T C A G T C C G T A A T G C
p-value:1e-11
log p-value:-2.548e+01
Information Content per bp:1.888
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 17.0bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GTGGCTAGCACAATGC
------VRRACAAWGG
 A T C G C G A T A C T G A C T G A T G C C A G T C G T A A C T G A T G C C G T A A G T C C G T A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GTGGCTAGCACAATGC
------AAAACAATGG
 A T C G C G A T A C T G A C T G A T G C C A G T C G T A A C T G A T G C C G T A A G T C C G T A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:GTGGCTAGCACAATGC-
--------GACAATGNN
 A T C G C G A T A C T G A C T G A T G C C A G T C G T A A C T G A T G C C G T A A G T C C G T A C T G A A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GTGGCTAGCACAATGC
------VRAACAATGG
 A T C G C G A T A C T G A C T G A T G C C A G T C G T A A C T G A T G C C G T A A G T C C G T A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTGGCTAGCACAATGC---
----CTCACACAATGGCGC
 A T C G C G A T A C T G A C T G A T G C C A G T C G T A A C T G A T G C C G T A A G T C C G T A C T G A A C G T A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:GTGGCTAGCACAATGC
---------ACAAAG-
 A T C G C G A T A C T G A C T G A T G C C A G T C G T A A C T G A T G C C G T A A G T C C G T A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GTGGCTAGCACAATGC
------RNAACAATGG
 A T C G C G A T A C T G A C T G A T G C C A G T C G T A A C T G A T G C C G T A A G T C C G T A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GTGGCTAGCACAATGC-
-------RAACAATGGN
 A T C G C G A T A C T G A C T G A T G C C A G T C G T A A C T G A T G C C G T A A G T C C G T A C T G A A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GTGGCTAGCACAATGC-
-------GAACAATGGN
 A T C G C G A T A C T G A C T G A T G C C A G T C G T A A C T G A T G C C G T A A G T C C G T A C T G A A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GTGGCTAGCACAATGC
------GGAACAAAGR
 A T C G C G A T A C T G A C T G A T G C C A G T C G T A A C T G A T G C C G T A A G T C C G T A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G