Information for 12-AACACTCCAC (Motif 21)

C G T A T C G A A G T C C G T A A G T C G C A T A G T C A G T C G T C A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G C G T A A C T G C G A T C T A G A G C T C G A T
p-value:1e-7
log p-value:-1.779e+01
Information Content per bp:1.819
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif96.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets49.8 +/- 24.7bp
Average Position of motif in Background51.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.77
Offset:4
Orientation:forward strand
Alignment:AACACTCCAC
----ATCCAC
 C G T A T C G A A G T C C G T A A G T C G C A T A G T C A G T C G T C A A G T C
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AACACTCCAC
NSCACTYVAV
 C G T A T C G A A G T C C G T A A G T C G C A T A G T C A G T C G T C A A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AACACTCCAC
ATCACCCCAT
 C G T A T C G A A G T C C G T A A G T C G C A T A G T C A G T C G T C A A G T C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AACACTCCAC
CNGTCACGCCAC
 A C G T A C G T C G T A T C G A A G T C C G T A A G T C G C A T A G T C A G T C G T C A A G T C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AACACTCCAC
RSCACTYRAG
 C G T A T C G A A G T C C G T A A G T C G C A T A G T C A G T C G T C A A G T C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AACACTCCAC
AASCACTCAA-
 A C G T C G T A T C G A A G T C C G T A A G T C G C A T A G T C A G T C G T C A A G T C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AACACTCCAC---
-SSAATCCACANN
 C G T A T C G A A G T C C G T A A G T C G C A T A G T C A G T C G T C A A G T C A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AACACTCCAC
MRSCACTYAA-
 A C G T C G T A T C G A A G T C C G T A A G T C G C A T A G T C A G T C G T C A A G T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AACACTCCAC
AGCCACTCAAG
 A C G T C G T A T C G A A G T C C G T A A G T C G C A T A G T C A G T C G T C A A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AACACTCCAC
-ACATTCCA-
 C G T A T C G A A G T C C G T A A G T C G C A T A G T C A G T C G T C A A G T C
A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T