Information for 5-ACATWWAATYTWRKTA (Motif 19)

C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A G C T A C G T C G A T C T G A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A G T C A A G C T C G T A C G T A C T G A C G T A A C G T C G A T C G A T C G A T C G T A A C G T A C T G A C G T
p-value:1e-8
log p-value:-1.950e+01
Information Content per bp:1.850
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.2 +/- 33.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROP1/MA0715.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:ACATWWAATYTWRKTA
-----TAATTTAATTA
 C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A G C T A C G T C G A T C T G A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:ACATWWAATYTWRKTA
-----TAATTTAATTA
 C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A G C T A C G T C G A T C T G A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:ACATWWAATYTWRKTA-
-----TAATYNRATTAR
 C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A G C T A C G T C G A T C T G A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

Phox2b/MA0681.1/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:forward strand
Alignment:ACATWWAATYTWRKTA
-----TAATTTAATTA
 C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A G C T A C G T C G A T C T G A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:ACATWWAATYTWRKTA-
-----TAATTNVATTAN
 C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A G C T A C G T C G A T C T G A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ACATWWAATYTWRKTA
----GTAATCDGATTA
 C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A G C T A C G T C G A T C T G A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACATWWAATYTWRKTA----
---NTNAATTTTATTGNATT
 C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A G C T A C G T C G A T C T G A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ACATWWAATYTWRKTA
AATATACATGTAATATA----
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A G C T A C G T C G A T C T G A A C G T A C G T C G T A
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACATWWAATYTWRKTA----
----TNAATTTTATTACCTN
 C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A G C T A C G T C G A T C T G A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACATWWAATYTWRKTA
ACGGCCATAAAATTAAT---
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A G C T A C G T C G A T C T G A A C G T A C G T C G T A
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T A C G T A C G T A C G T