Information for 1-TTTATBASTC (Motif 1)

G A C T G A C T G C A T T C G A A C G T A T C G C T G A T A G C G A C T G T A C
Reverse Opposite:
C A T G C T G A A T C G A G C T T A G C C G T A A C G T C G T A C T G A C T G A
p-value:1e-21
log p-value:-4.846e+01
Information Content per bp:1.630
Number of Target Sequences with motif180.0
Percentage of Target Sequences with motif22.03%
Number of Background Sequences with motif5051.2
Percentage of Background Sequences with motif10.49%
Average Position of motif in Targets48.5 +/- 25.9bp
Average Position of motif in Background50.4 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA10/MA0899.1/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TTTATBASTC
NTTTTATTACN-
 A C G T A C G T G A C T G A C T G C A T T C G A A C G T A T C G C T G A T A G C G A C T G T A C
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T

CDX1/MA0878.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TTTATBASTC
TTTTATTGC--
 A C G T G A C T G A C T G C A T T C G A A C G T A T C G C T G A T A G C G A C T G T A C
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TTTATBASTC
TTTTATGGCTN
 A C G T G A C T G A C T G C A T T C G A A C G T A T C G C T G A T A G C G A C T G T A C
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TTTATBASTC
NTTTTATGAC--
 A C G T A C G T G A C T G A C T G C A T T C G A A C G T A T C G C T G A T A G C G A C T G T A C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATBASTC-
NGANTTTTATGGCTCN
 A C G T A C G T A C G T A C G T A C G T G A C T G A C T G C A T T C G A A C G T A T C G C T G A T A G C G A C T G T A C A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTTATBASTC
TTTTATTRGN-
 A C G T G A C T G A C T G C A T T C G A A C G T A T C G C T G A T A G C G A C T G T A C
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TTTATBASTC--
NAATTTTATTACCNNN
 A C G T A C G T A C G T A C G T G A C T G A C T G C A T T C G A A C G T A T C G C T G A T A G C G A C T G T A C A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

MEOX2/MA0706.1/Jaspar

Match Rank:8
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTTATBASTC
NTTAATTACN-
 A C G T G A C T G A C T G C A T T C G A A C G T A T C G C T G A T A G C G A C T G T A C
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:9
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTTATBASTC
TTTAATTANN-
 A C G T G A C T G A C T G C A T T C G A A C G T A T C G C T G A T A G C G A C T G T A C
C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TTTATBASTC
NTTTTATTGG--
 A C G T A C G T G A C T G A C T G C A T T C G A A C G T A T C G C T G A T A G C G A C T G T A C
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T