Information for 4-CCSCYMAAAAAAA (Motif 12)

A G T C A G T C A T C G A G T C A G C T G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A
Reverse Opposite:
C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A T G C A C T G A C T G
p-value:1e-5
log p-value:-1.257e+01
Information Content per bp:1.824
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif3.60%
Number of Background Sequences with motif77.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets53.9 +/- 21.4bp
Average Position of motif in Background46.1 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCSCYMAAAAAAA--
-TACTGGAAAAAAAA
 A G T C A G T C A T C G A G T C A G C T G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A A C G T A C G T
A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCSCYMAAAAAAA------
--GTTCAAAAAAAAAATTC
 A G T C A G T C A T C G A G T C A G C T G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCSCYMAAAAAAA
--CCYMATAAAA-
 A G T C A G T C A T C G A G T C A G C T G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCSCYMAAAAAAA------
--GTTAAAAAAAAAAATTA
 A G T C A G T C A T C G A G T C A G C T G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCSCYMAAAAAAA
---CCAATAAAAA
 A G T C A G T C A T C G A G T C A G C T G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCSCYMAAAAAAA
AAGCCCCCCAAAAAT-
 A C G T A C G T A C G T A G T C A G T C A T C G A G T C A G C T G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCSCYMAAAAAAA--
AGCCGAAAAAAAAAT
 A G T C A G T C A T C G A G T C A G C T G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCSCYMAAAAAAA
---CCAATAAAAC
 A G T C A G T C A T C G A G T C A G C T G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCSCYMAAAAAAA
---CCAATAAAAA
 A G T C A G T C A T C G A G T C A G C T G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCSCYMAAAAAAA---
AACCCAATAAAATTCG
 A G T C A G T C A T C G A G T C A G C T G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G