Information for 2-MTGTGCAAAACATGCG (Motif 4)

G T A C C G A T A C T G A C G T A C T G A T G C G T C A C G T A C G T A T G C A G T A C G T C A G A C T A C T G G T A C A C T G
Reverse Opposite:
G T A C A C T G A G T C C T G A A C G T A C T G A C G T A C G T A C G T A C G T A T C G T A G C T G C A G T A C C G T A C A T G
p-value:1e-13
log p-value:-3.106e+01
Information Content per bp:1.709
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.5 +/- 20.7bp
Average Position of motif in Background25.4 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:MTGTGCAAAACATGCG--
----GCAAAACATTACTA
 G T A C C G A T A C T G A C G T A C T G A T G C G T C A C G T A C G T A T G C A G T A C G T C A G A C T A C T G G T A C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:MTGTGCAAAACATGCG
ATTTGCATACAATGG-
 G T A C C G A T A C T G A C G T A C T G A T G C G T C A C G T A C G T A T G C A G T A C G T C A G A C T A C T G G T A C A C T G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MTGTGCAAAACATGCG-
AACACCAAAACAAAGGA
 G T A C C G A T A C T G A C G T A C T G A T G C G T C A C G T A C G T A T G C A G T A C G T C A G A C T A C T G G T A C A C T G A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:MTGTGCAAAACATGCG
ATATGCAAAT------
 G T A C C G A T A C T G A C G T A C T G A T G C G T C A C G T A C G T A T G C A G T A C G T C A G A C T A C T G G T A C A C T G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-MTGTGCAAAACATGCG
CAATTGCAAAAATAT--
 A C G T G T A C C G A T A C T G A C G T A C T G A T G C G T C A C G T A C G T A T G C A G T A C G T C A G A C T A C T G G T A C A C T G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----MTGTGCAAAACATGCG
GGGCCGTGTGCAAAAA-----
 A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C T G A C G T A C T G A T G C G T C A C G T A C G T A T G C A G T A C G T C A G A C T A C T G G T A C A C T G
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:MTGTGCAAAACATGCG
---TGGAAAA------
 G T A C C G A T A C T G A C G T A C T G A T G C G T C A C G T A C G T A T G C A G T A C G T C A G A C T A C T G G T A C A C T G
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:MTGTGCAAAACATGCG----
NANTGGAAAAANTGAGTCAN
 G T A C C G A T A C T G A C G T A C T G A T G C G T C A C G T A C G T A T G C A G T A C G T C A G A C T A C T G G T A C A C T G A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:MTGTGCAAAACATGCG
TTATGCAAAT------
 G T A C C G A T A C T G A C G T A C T G A T G C G T C A C G T A C G T A T G C A G T A C G T C A G A C T A C T G G T A C A C T G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----MTGTGCAAAACATGCG
GTGCCGTGTGCAAA-------
 A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C T G A C G T A C T G A T G C G T C A C G T A C G T A T G C A G T A C G T C A G A C T A C T G G T A C A C T G
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T