Information for 2-TGTTTACTTT (Motif 3)

A C G T C T A G C G A T A G C T C A G T C G T A G T A C A G C T A G C T G A C T
Reverse Opposite:
C T G A T C G A C T G A C A T G G C A T G T C A C T G A C G T A A G T C C G T A
p-value:1e-16
log p-value:-3.746e+01
Information Content per bp:1.734
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif7.50%
Number of Background Sequences with motif1037.1
Percentage of Background Sequences with motif2.13%
Average Position of motif in Targets48.3 +/- 25.9bp
Average Position of motif in Background50.7 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TGTTTACTTT
TGTTTACTTT
 A C G T C T A G C G A T A G C T C A G T C G T A G T A C A G C T A G C T G A C T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TGTTTACTTT
TGTTTACTTT
 A C G T C T A G C G A T A G C T C A G T C G T A G T A C A G C T A G C T G A C T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.90
Offset:0
Orientation:forward strand
Alignment:TGTTTACTTT
TGTTTATTT-
 A C G T C T A G C G A T A G C T C A G T C G T A G T A C A G C T A G C T G A C T
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.90
Offset:-4
Orientation:forward strand
Alignment:----TGTTTACTTT-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A C G T C T A G C G A T A G C T C A G T C G T A G T A C A G C T A G C T G A C T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.89
Offset:0
Orientation:forward strand
Alignment:TGTTTACTTT
TRTTTACTTW
 A C G T C T A G C G A T A G C T C A G T C G T A G T A C A G C T A G C T G A C T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.89
Offset:0
Orientation:forward strand
Alignment:TGTTTACTTT--
TGTTTACTTAGG
 A C G T C T A G C G A T A G C T C A G T C G T A G T A C A G C T A G C T G A C T A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACTTT
TTTGTTTACTTA
 A C G T A C G T A C G T C T A G C G A T A G C T C A G T C G T A G T A C A G C T A G C T G A C T
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACTTT
TNTGTTTACTT-
 A C G T A C G T A C G T C T A G C G A T A G C T C A G T C G T A G T A C A G C T A G C T G A C T
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--TGTTTACTTT
CNTGTTTACATA
 A C G T A C G T A C G T C T A G C G A T A G C T C A G T C G T A G T A C A G C T A G C T G A C T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTACTTT--
CTTTGTTTACTTTTN
 A C G T A C G T A C G T A C G T C T A G C G A T A G C T C A G T C G T A G T A C A G C T A G C T G A C T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G