Information for 8-TTTATGATCT (Motif 20)

A C G T A G C T A C G T C G T A A C G T A T C G T C G A C G A T A T G C A C G T
Reverse Opposite:
C G T A A T C G G C T A A C G T T A G C G T C A C G A T C G T A C T G A C G T A
p-value:1e-8
log p-value:-1.894e+01
Information Content per bp:1.840
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif104.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets44.4 +/- 25.3bp
Average Position of motif in Background53.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTTATGATCT
DGWTTTATGRCN-
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C G T A T C G T C G A C G A T A T G C A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGATCT--
NAATTTTATTACCTNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C G T A T C G T C G A C G A T A T G C A C G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGATCT
NTTTTATGAC--
 A C G T A C G T A C G T A G C T A C G T C G T A A C G T A T C G T C G A C G A T A T G C A C G T
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGATCT--
NAATTTTATTACCNNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C G T A T C G T C G A C G A T A T G C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGATCT
TTTTATGGCTN
 A C G T A C G T A G C T A C G T C G T A A C G T A T C G T C G A C G A T A T G C A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGATCT
NTTTTACGAC--
 A C G T A C G T A C G T A G C T A C G T C G T A A C G T A T C G T C G A C G A T A T G C A C G T
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGATCT
TTTTATTGC--
 A C G T A C G T A G C T A C G T C G T A A C G T A T C G T C G A C G A T A T G C A C G T
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGATCT--
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C G T A T C G T C G A C G A T A T G C A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PH0073.1_Hoxc9/Jaspar

Match Rank:9
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGATCT--
NNAATTAATGACCNNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C G T A T C G T C G A C G A T A T G C A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTATGATCT
ANTTTTACGACC-
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C G T A T C G T C G A C G A T A T G C A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T