Information for 14-TCWTGGSCAVAST (Motif 16)

A C G T A G T C C G A T A C G T C T A G A C T G A T G C A G T C C G T A T A C G G T C A A T C G A C G T
Reverse Opposite:
G T C A A T G C A C G T A G T C A C G T A C T G A T C G A G T C G A T C T C G A C G T A A C T G C G T A
p-value:1e-9
log p-value:-2.092e+01
Information Content per bp:1.784
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif26.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets39.2 +/- 24.6bp
Average Position of motif in Background46.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCWTGGSCAVAST-
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A G T C C G A T A C G T C T A G A C T G A T G C A G T C C G T A T A C G G T C A A T C G A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCWTGGSCAVAST
AAGTTCAAGGTCAGC--
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T C T A G A C T G A T G C A G T C C G T A T A C G G T C A A T C G A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCWTGGSCAVAST
NTCAAGGTCA----
 A C G T A C G T A G T C C G A T A C G T C T A G A C T G A T G C A G T C C G T A T A C G G T C A A T C G A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCWTGGSCAVAST
AGGTCAAGGTCA----
 A C G T A C G T A C G T A C G T A G T C C G A T A C G T C T A G A C T G A T G C A G T C C G T A T A C G G T C A A T C G A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCWTGGSCAVAST
BTCAAGGTCA----
 A C G T A C G T A G T C C G A T A C G T C T A G A C T G A T G C A G T C C G T A T A C G G T C A A T C G A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCWTGGSCAVAST
TCAAGGTCATA--
 A C G T A G T C C G A T A C G T C T A G A C T G A T G C A G T C C G T A T A C G G T C A A T C G A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCWTGGSCAVAST
-CAAGGHCANV--
 A C G T A G T C C G A T A C G T C T A G A C T G A T G C A G T C C G T A T A C G G T C A A T C G A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCWTGGSCAVAST
-NGTGGGCAT---
 A C G T A G T C C G A T A C G T C T A G A C T G A T G C A G T C C G T A T A C G G T C A A T C G A C G T
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCWTGGSCAVAST
--CGTGCCAAG--
 A C G T A G T C C G A T A C G T C T A G A C T G A T G C A G T C C G T A T A C G G T C A A T C G A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCWTGGSCAVAST
TTCAAGGTCAT---
 A C G T A C G T A G T C C G A T A C G T C T A G A C T G A T G C A G T C C G T A T A C G G T C A A T C G A C G T
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T