Information for 10-TGGAAGKTCTCCA (Motif 11)

A C G T A C T G A C T G T C G A C T G A T A C G C A G T C G A T A G T C A C G T A G T C A G T C G C T A
Reverse Opposite:
C G A T A C T G C T A G C G T A A C T G C G T A G T C A A G T C A G C T A G C T A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.462e+01
Information Content per bp:1.817
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.9 +/- 24.9bp
Average Position of motif in Background51.0 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAGKTCTCCA
NNTGGAAANN-----
 A C G T A C G T A C G T A C T G A C T G T C G A C T G A T A C G C A G T C G A T A G T C A C G T A G T C A G T C G C T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGGAAGKTCTCCA
-GGAAATTCCC--
 A C G T A C T G A C T G T C G A C T G A T A C G C A G T C G A T A G T C A C G T A G T C A G T C G C T A
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAGKTCTCCA
AATGGAAAAT-----
 A C G T A C G T A C G T A C T G A C T G T C G A C T G A T A C G C A G T C G A T A G T C A C G T A G T C A G T C G C T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAGKTCTCCA
AATGGAAAAT-----
 A C G T A C G T A C G T A C T G A C T G T C G A C T G A T A C G C A G T C G A T A G T C A C G T A G T C A G T C G C T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGGAAGKTCTCCA
-GGAAATTCCC--
 A C G T A C T G A C T G T C G A C T G A T A C G C A G T C G A T A G T C A C G T A G T C A G T C G C T A
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGGAAGKTCTCCA--
TTGGCANNNTGCCAAG
 A C G T A C G T A C T G A C T G T C G A C T G A T A C G C A G T C G A T A G T C A C G T A G T C A G T C G C T A A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGAAGKTCTCCA
CTGGCAGNCTGCCA
 A C G T A C G T A C T G A C T G T C G A C T G A T A C G C A G T C G A T A G T C A C G T A G T C A G T C G C T A
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGAAGKTCTCCA
TGGAAAA------
 A C G T A C T G A C T G T C G A C T G A T A C G C A G T C G A T A G T C A C G T A G T C A G T C G C T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGGAAGKTCTCCA-
TGGCACCATGCCAA
 A C G T A C T G A C T G T C G A C T G A T A C G C A G T C G A T A G T C A C G T A G T C A G T C G C T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGAAGKTCTCCA
-GGAAATCCCC--
 A C G T A C T G A C T G T C G A C T G A T A C G C A G T C G A T A G T C A C G T A G T C A G T C G C T A
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T