Information for 2-MAGTGCATTTTAA (Motif 6)

G T A C G T C A A C T G G A C T A C T G A T G C G C T A G A C T A C G T A C G T C G A T C G T A C G T A
Reverse Opposite:
C G A T C G A T C G T A G T C A G T C A C T G A C A G T A T C G G T A C C G T A A G T C A C G T C A T G
p-value:1e-7
log p-value:-1.784e+01
Information Content per bp:1.698
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif13.11%
Number of Background Sequences with motif361.4
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets42.1 +/- 27.4bp
Average Position of motif in Background54.6 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MAGTGCATTTTAA--
CCTTGCAATTTTTNN
 G T A C G T C A A C T G G A C T A C T G A T G C G C T A G A C T A C G T A C G T C G A T C G T A C G T A A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-MAGTGCATTTTAA--
NNATTGGACTTTNGNN
 A C G T G T A C G T C A A C T G G A C T A C T G A T G C G C T A G A C T A C G T A C G T C G A T C G T A C G T A A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:MAGTGCATTTTAA----
------ATATTAATTAA
 G T A C G T C A A C T G G A C T A C T G A T G C G C T A G A C T A C G T A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:MAGTGCATTTTAA-
--------TTTAAT
 G T A C G T C A A C T G G A C T A C T G A T G C G C T A G A C T A C G T A C G T C G A T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:5
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:MAGTGCATTTTAA-----
--------TTTAATTGCN
 G T A C G T C A A C T G G A C T A C T G A T G C G C T A G A C T A C G T A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----MAGTGCATTTTAA
AATCGCACTGCATTCCG-
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A A C T G G A C T A C T G A T G C G C T A G A C T A C G T A C G T C G A T C G T A C G T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:MAGTGCATTTTAA
----GCACTTAA-
 G T A C G T C A A C T G G A C T A C T G A T G C G C T A G A C T A C G T A C G T C G A T C G T A C G T A
A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:MAGTGCATTTTAA----
-ATTGGACTTTGACCCC
 G T A C G T C A A C T G G A C T A C T G A T G C G C T A G A C T A C G T A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:MAGTGCATTTTAA--
------ATTTGAATT
 G T A C G T C A A C T G G A C T A C T G A T G C G C T A G A C T A C G T A C G T C G A T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:MAGTGCATTTTAA------
---TNAATTTTATTACCTN
 G T A C G T C A A C T G G A C T A C T G A T G C G C T A G A C T A C G T A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A