Information for 6-ATAAGAAAGG (Motif 20)

G C T A C G A T G T C A C T G A C T A G T G C A G C T A C G T A C T A G C T A G
Reverse Opposite:
G A T C A G T C G C A T C G A T A C G T G A T C G A C T C A G T G C T A C G A T
p-value:1e-8
log p-value:-1.926e+01
Information Content per bp:1.679
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif13.61%
Number of Background Sequences with motif3722.0
Percentage of Background Sequences with motif7.65%
Average Position of motif in Targets49.5 +/- 26.2bp
Average Position of motif in Background49.2 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATAAGAAAGG-----
-GGAGAAAGGTGCGA
 G C T A C G A T G T C A C T G A C T A G T G C A G C T A C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATAAGAAAGG----
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T G C T A C G A T G T C A C T G A C T A G T G C A G C T A C G T A C T A G C T A G A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATAAGAAAGG----
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T G C T A C G A T G T C A C T G A C T A G T G C A G C T A C G T A C T A G C T A G A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATAAGAAAGG
AAAACAAAGG
 G C T A C G A T G T C A C T G A C T A G T G C A G C T A C G T A C T A G C T A G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ATAAGAAAGG
--AACAAAGG
 G C T A C G A T G T C A C T G A C T A G T G C A G C T A C G T A C T A G C T A G
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATAAGAAAGG--
AAATAAGAAAAAAC
 A C G T A C G T G C T A C G A T G T C A C T G A C T A G T G C A G C T A C G T A C T A G C T A G A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATAAGAAAGG-
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T G C T A C G A T G T C A C T G A C T A G T G C A G C T A C G T A C T A G C T A G A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATAAGAAAGG
--RACAAWGG
 G C T A C G A T G T C A C T G A C T A G T G C A G C T A C G T A C T A G C T A G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.62
Offset:-9
Orientation:forward strand
Alignment:---------ATAAGAAAGG---
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G T C A C T G A C T A G T G C A G C T A C G T A C T A G C T A G A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATAAGAAAGG
GGAACAAAGR
 G C T A C G A T G T C A C T G A C T A G T G C A G C T A C G T A C T A G C T A G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G