Information for 1-CCAAACTTCATYCTSA (Motif 2)

A G T C A G T C C G T A C T G A C G T A T A G C A G C T A C G T G T A C C T G A C A G T G A T C A T G C G A C T A T C G C G T A
Reverse Opposite:
C G A T T A G C C T G A A T C G C T A G G T C A A G C T A C T G C G T A C T G A A T C G A C G T A G C T A C G T T A C G C T A G
p-value:1e-18
log p-value:-4.343e+01
Information Content per bp:1.715
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 21.7bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCAAACTTCATYCTSA
AGAGTCCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G T A T A G C A G C T A C G T G T A C C T G A C A G T G A T C A T G C G A C T A T C G C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CCAAACTTCATYCTSA
CANAGNNCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G T A T A G C A G C T A C G T G T A C C T G A C A G T G A T C A T G C G A C T A T C G C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAAACTTCATYCTSA
TCTCAAAGGTCACCTG--
 A C G T A C G T A G T C A G T C C G T A C T G A C G T A T A G C A G C T A C G T G T A C C T G A C A G T G A T C A T G C G A C T A T C G C G T A
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCAAACTTCATYCTSA
-CAAAGGTCAG-----
 A G T C A G T C C G T A C T G A C G T A T A G C A G C T A C G T G T A C C T G A C A G T G A T C A T G C G A C T A T C G C G T A
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCAAACTTCATYCTSA
ANGNAAAGGTCA------
 A C G T A C G T A G T C A G T C C G T A C T G A C G T A T A G C A G C T A C G T G T A C C T G A C A G T G A T C A T G C G A C T A T C G C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCAAACTTCATYCTSA
CGTATCGAAACCAAA------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G T A T A G C A G C T A C G T G T A C C T G A C A G T G A T C A T G C G A C T A T C G C G T A
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCAAACTTCATYCTSA
TCTCAAAGGTCACGAG--
 A C G T A C G T A G T C A G T C C G T A C T G A C G T A T A G C A G C T A C G T G T A C C T G A C A G T G A T C A T G C G A C T A T C G C G T A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCAAACTTCATYCTSA
GGGGTCAAAGGTCA------
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G T A T A G C A G C T A C G T G T A C C T G A C A G T G A T C A T G C G A C T A T C G C G T A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCAAACTTCATYCTSA
GGGGTCAAAGGTCA------
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G T A T A G C A G C T A C G T G T A C C T G A C A G T G A T C A T G C G A C T A T C G C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCAAACTTCATYCTSA
GGGGTCAAAGGTCA------
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G T A T A G C A G C T A C G T G T A C C T G A C A G T G A T C A T G C G A C T A T C G C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T