Information for 4-GGGAAATGTAGTT (Motif 9)

A T C G A C T G T A C G C G T A C T G A G C T A C A G T C A T G C A G T T C G A T A C G G A C T G A C T
Reverse Opposite:
C T G A C G T A A T G C A G C T G C T A G T A C G T C A C G A T G A C T A C G T A T G C A G T C T A G C
p-value:1e-11
log p-value:-2.724e+01
Information Content per bp:1.642
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif321.0
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets48.5 +/- 24.2bp
Average Position of motif in Background48.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GGGAAATGTAGTT
GGGAATTGTAGT-
 A T C G A C T G T A C G C G T A C T G A G C T A C A G T C A T G C A G T T C G A T A C G G A C T G A C T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.79
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAAATGTAGTT
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G T A C G C G T A C T G A G C T A C A G T C A T G C A G T T C G A T A C G G A C T G A C T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:3
Score:0.78
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAAATGTAGTT
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G T A C G C G T A C T G A G C T A C A G T C A T G C A G T T C G A T A C G G A C T G A C T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGGAAATGTAGTT--
-----CTGTGGTTTN
 A T C G A C T G T A C G C G T A C T G A G C T A C A G T C A T G C A G T T C G A T A C G G A C T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGGAAATGTAGTT--
---NNHTGTGGTTWN
 A T C G A C T G T A C G C G T A C T G A G C T A C A G T C A T G C A G T T C G A T A C G G A C T G A C T A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGGAAATGTAGTT-
----NNTGTGGTTT
 A T C G A C T G T A C G C G T A C T G A G C T A C A G T C A T G C A G T T C G A T A C G G A C T G A C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAATGTAGTT
CSTGGGAAAD------
 A C G T A C G T A C G T A T C G A C T G T A C G C G T A C T G A G C T A C A G T C A T G C A G T T C G A T A C G G A C T G A C T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGAAATGTAGTT---
-TTGAATGAAATTCGA
 A T C G A C T G T A C G C G T A C T G A G C T A C A G T C A T G C A G T T C G A T A C G G A C T G A C T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGGAAATGTAGTT
TGGCGGGAAAHB-----
 A C G T A C G T A C G T A C G T A T C G A C T G T A C G C G T A C T G A G C T A C A G T C A T G C A G T T C G A T A C G G A C T G A C T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGGAAATGTAGTT-
----GCTGTGGTTT
 A T C G A C T G T A C G C G T A C T G A G C T A C A G T C A T G C A G T T C G A T A C G G A C T G A C T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T