Information for 3-TTGWGACGATYTW (Motif 6)

A C G T A C G T A C T G C G A T A C T G C G T A A G T C A C T G C G T A C G A T A G C T A C G T G C A T
Reverse Opposite:
C G T A G T C A C T G A C G T A A C G T A G T C A C T G A C G T A G T C G C A T A G T C C G T A C G T A
p-value:1e-13
log p-value:-3.052e+01
Information Content per bp:1.887
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 28.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGWGACGATYTW----
-TTTTACGACTTTCCAT
 A C G T A C G T A C T G C G A T A C T G C G T A A G T C A C T G C G T A C G A T A G C T A C G T G C A T A C G T A C G T A C G T A C G T
A C G T C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGWGACGATYTW--
NNTAAAAACGATGTTNT
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G C G T A A G T C A C T G C G T A C G A T A G C T A C G T G C A T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTGWGACGATYTW-
GAATGACGAATAAC
 A C G T A C G T A C T G C G A T A C T G C G T A A G T C A C T G C G T A C G A T A G C T A C G T G C A T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTGWGACGATYTW---
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C T G C G A T A C T G C G T A A G T C A C T G C G T A C G A T A G C T A C G T G C A T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTGWGACGATYTW
NNCNNAACAATTNT
 A C G T A C G T A C G T A C T G C G A T A C T G C G T A A G T C A C T G C G T A C G A T A G C T A C G T G C A T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TTGWGACGATYTW
CTACTTGGATACGGAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G C G T A A G T C A C T G C G T A C G A T A G C T A C G T G C A T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TTGWGACGATYTW
RTCATGTGAC------
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G C G T A A G T C A C T G C G T A C G A T A G C T A C G T G C A T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TTGWGACGATYTW--
TWGHWACAWTGTWDC
 A C G T A C G T A C T G C G A T A C T G C G T A A G T C A C T G C G T A C G A T A G C T A C G T G C A T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTGWGACGATYTW-----
-TNNNATGATTTCNNCNN
 A C G T A C G T A C T G C G A T A C T G C G T A A G T C A C T G C G T A C G A T A G C T A C G T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Atf1/MA0604.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TTGWGACGATYTW
--ATGACGTA---
 A C G T A C G T A C T G C G A T A C T G C G T A A G T C A C T G C G T A C G A T A G C T A C G T G C A T
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T