Information for 2-RTGAGTCAKC (Motif 3)

T C G A A C G T A T C G G C T A A T C G A C G T A G T C C G T A C A T G A T G C
Reverse Opposite:
T A C G G T A C A C G T A C T G G T C A T A G C C G A T A T G C C G T A A G C T
p-value:1e-19
log p-value:-4.558e+01
Information Content per bp:1.662
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif8.35%
Number of Background Sequences with motif1030.3
Percentage of Background Sequences with motif2.25%
Average Position of motif in Targets53.5 +/- 26.5bp
Average Position of motif in Background50.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS::JUN/MA0099.2/Jaspar

Match Rank:1
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:RTGAGTCAKC
-TGAGTCA--
 T C G A A C G T A T C G G C T A A T C G A C G T A G T C C G T A C A T G A T G C
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:RTGAGTCAKC
ATGASTCATY
 T C G A A C G T A T C G G C T A A T C G A C G T A G T C C G T A C A T G A T G C
T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RTGAGTCAKC-
NATGASTCABNN
 A C G T T C G A A C G T A T C G G C T A A T C G A C G T A G T C C G T A C A T G A T G C A C G T
C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--RTGAGTCAKC
NNATGAGTCATN
 A C G T A C G T T C G A A C G T A T C G G C T A A T C G A C G T A G T C C G T A C A T G A T G C
C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-RTGAGTCAKC
GATGAGTCAT-
 A C G T T C G A A C G T A T C G G C T A A T C G A C G T A G T C C G T A C A T G A T G C
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:6
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-RTGAGTCAKC-
GATGAGTCATCC
 A C G T T C G A A C G T A T C G G C T A A T C G A C G T A G T C C G T A C A T G A T G C A C G T
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:7
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-RTGAGTCAKC-
DATGASTCATHN
 A C G T T C G A A C G T A T C G G C T A A T C G A C G T A G T C C G T A C A T G A T G C A C G T
C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:RTGAGTCAKC
ATGASTCATH
 T C G A A C G T A T C G G C T A A T C G A C G T A G T C C G T A C A T G A T G C
T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:9
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--RTGAGTCAKC
NNATGASTCATH
 A C G T A C G T T C G A A C G T A T C G G C T A A T C G A C G T A G T C C G T A C A T G A T G C
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

FOSL1/MA0477.1/Jaspar

Match Rank:10
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-RTGAGTCAKC
GGTGACTCATG
 A C G T T C G A A C G T A T C G G C T A A T C G A C G T A G T C C G T A C A T G A T G C
C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G