Information for 14-CCATTGGCCAATG (Motif 18)

T A G C G T A C C G T A C G A T C G A T T C A G C T A G A G T C A G T C G T C A C T G A A G C T A C T G
Reverse Opposite:
G T A C C T G A A G C T A C G T T C A G T C A G A G T C A G T C G C T A G C T A G A C T C A T G A C T G
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.631
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.06%
Number of Background Sequences with motif336.0
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets49.8 +/- 24.0bp
Average Position of motif in Background51.0 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCATTGGCCAATG
CCGATTGGCT----
 A C G T T A G C G T A C C G T A C G A T C G A T T C A G C T A G A G T C A G T C G T C A C T G A A G C T A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCATTGGCCAATG-
--ACTAGCCAATCA
 T A G C G T A C C G T A C G A T C G A T T C A G C T A G A G T C A G T C G T C A C T G A A G C T A C T G A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCATTGGCCAATG--
AAATGGACCAATCAG
 T A G C G T A C C G T A C G A T C G A T T C A G C T A G A G T C A G T C G T C A C T G A A G C T A C T G A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCATTGGCCAATG
-----TGCCAA--
 T A G C G T A C C G T A C G A T C G A T T C A G C T A G A G T C A G T C G T C A C T G A A G C T A C T G
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCATTGGCCAATG
--GTTGCGCAAT-
 T A G C G T A C C G T A C G A T C G A T T C A G C T A G A G T C A G T C G T C A C T G A A G C T A C T G
A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCATTGGCCAATG
TGTTCCCATTGTGTACT-
 A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C G A T C G A T T C A G C T A G A G T C A G T C G T C A C T G A A G C T A C T G
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCATTGGCCAATG
TCACCTCTGGGCAG--
 A C G T A C G T A C G T T A G C G T A C C G T A C G A T C G A T T C A G C T A G A G T C A G T C G T C A C T G A A G C T A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCATTGGCCAATG
---CGTGCCAAG-
 T A G C G T A C C G T A C G A T C G A T T C A G C T A G A G T C A G T C G T C A C T G A A G C T A C T G
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCATTGGCCAATG
NCCATTGTTC----
 A C G T T A G C G T A C C G T A C G A T C G A T T C A G C T A G A G T C A G T C G T C A C T G A A G C T A C T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCATTGGCCAATG
--ATTGCGCAAT-
 T A G C G T A C C G T A C G A T C G A T T C A G C T A G A G T C A G T C G T C A C T G A A G C T A C T G
A C G T A C G T T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T A C G T