Information for 2-GGAGAGGGCAAGG (Motif 8)

A C T G C T A G C G T A A C T G C G T A C T A G A T C G A C T G A G T C C G T A C T G A A C T G A C T G
Reverse Opposite:
A G T C A G T C A G C T A C G T T C A G A G T C A T G C A G T C C G A T A G T C A C G T A G T C A G T C
p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.857
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.4 +/- 26.7bp
Average Position of motif in Background43.5 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGAGAGGGCAAGG---
----TGGGGAAGGGCM
 A C T G C T A G C G T A A C T G C G T A C T A G A T C G A C T G A G T C C G T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGAGAGGGCAAGG---
----AGGTCAAGGTCA
 A C T G C T A G C G T A A C T G C G T A C T A G A T C G A C T G A G T C C G T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGAGAGGGCAAGG---
----AGGTCAAGGTCA
 A C T G C T A G C G T A A C T G C G T A C T A G A T C G A C T G A G T C C G T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

SP4/MA0685.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAGAGGGCAAGG----
NAAGGGGGCGTGGCTTN
 A C T G C T A G C G T A A C T G C G T A C T A G A T C G A C T G A G T C C G T A C T G A A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGAGAGGGCAAGG-
--RGTGGGYGTGGC
 A C T G C T A G C G T A A C T G C G T A C T A G A T C G A C T G A G T C C G T A C T G A A C T G A C T G A C G T
A C G T A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGAGAGGGCAAGG
--NGTGGGCAT--
 A C T G C T A G C G T A A C T G C G T A C T A G A T C G A C T G A G T C C G T A C T G A A C T G A C T G
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGGGCAAGG--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C T G C T A G C G T A A C T G C G T A C T A G A T C G A C T G A G T C C G T A C T G A A C T G A C T G A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGAGAGGGCAAGG--
----AAGGCAAGTGT
 A C T G C T A G C G T A A C T G C G T A C T A G A T C G A C T G A G T C C G T A C T G A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGAGAGGGCAAGG
--TNNGGGCAG--
 A C T G C T A G C G T A A C T G C G T A C T A G A T C G A C T G A G T C C G T A C T G A A C T G A C T G
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGAGAGGGCAAGG-
GGCGGGGGCGGGGG
 A C T G C T A G C G T A A C T G C G T A C T A G A T C G A C T G A G T C C G T A C T G A A C T G A C T G A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G