Information for 1-RRRAGMGRCKAGWAAS (Motif 2)

C T A G T C G A C T G A G T C A A C T G G T A C A C T G C T A G A T G C A C T G C G T A A C T G C G A T C T G A G T C A A T C G
Reverse Opposite:
A T G C A C G T A G C T G C T A A G T C A C G T G T A C A T C G A G T C G T A C C A T G A G T C A C G T A G C T A G C T A G T C
p-value:1e-13
log p-value:-3.054e+01
Information Content per bp:1.793
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 20.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:1
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:RRRAGMGRCKAGWAAS-
-----TGGCGGGAAAHB
 C T A G T C G A C T G A G T C A A C T G G T A C A C T G C T A G A T G C A C T G C G T A A C T G C G A T C T G A G T C A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.49
Offset:4
Orientation:forward strand
Alignment:RRRAGMGRCKAGWAAS
----AAGGCAAGTGT-
 C T A G T C G A C T G A G T C A A C T G G T A C A C T G C T A G A T G C A C T G C G T A A C T G C G A T C T G A G T C A A T C G
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-RRRAGMGRCKAGWAAS
TAGAANVTTCTAGAA--
 A C G T C T A G T C G A C T G A G T C A A C T G G T A C A C T G C T A G A T G C A C T G C G T A A C T G C G A T C T G A G T C A A T C G
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.49
Offset:2
Orientation:forward strand
Alignment:RRRAGMGRCKAGWAAS-
--ARGAGGMCAAAATGW
 C T A G T C G A C T G A G T C A A C T G G T A C A C T G C T A G A T G C A C T G C G T A A C T G C G A T C T G A G T C A A T C G A C G T
A C G T A C G T T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

HSF4/MA0771.1/Jaspar

Match Rank:5
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:RRRAGMGRCKAGWAAS
-GAANNTTCTAGAA--
 C T A G T C G A C T G A G T C A A C T G G T A C A C T G C T A G A T G C A C T G C G T A A C T G C G A T C T G A G T C A A T C G
A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:RRRAGMGRCKAGWAAS
-GAANGTTCTAGAA--
 C T A G T C G A C T G A G T C A A C T G G T A C A C T G C T A G A T G C A C T G C G T A A C T G C G A T C T G A G T C A A T C G
A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:forward strand
Alignment:RRRAGMGRCKAGWAAS
-----CGTCTAGACA-
 C T A G T C G A C T G A G T C A A C T G G T A C A C T G C T A G A T G C A C T G C G T A A C T G C G A T C T G A G T C A A T C G
A C G T A C G T A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:RRRAGMGRCKAGWAAS
--GAATGACGAATAAC
 C T A G T C G A C T G A G T C A A C T G G T A C A C T G C T A G A T G C A C T G C G T A A C T G C G A T C T G A G T C A A T C G
A C G T A C G T T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.48
Offset:7
Orientation:forward strand
Alignment:RRRAGMGRCKAGWAAS-
-------ANCAGGAAGT
 C T A G T C G A C T G A G T C A A C T G G T A C A C T G C T A G A T G C A C T G C G T A A C T G C G A T C T G A G T C A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.47
Offset:4
Orientation:forward strand
Alignment:RRRAGMGRCKAGWAAS
----CWGGCGGGAA--
 C T A G T C G A C T G A G T C A A C T G G T A C A C T G C T A G A T G C A C T G C G T A A C T G C G A T C T G A G T C A A T C G
A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T