Information for 9-TACGCATGCG (Motif 18)

A C G T T C G A G T A C T A C G G T A C G T C A A C G T T C A G G A T C T C A G
Reverse Opposite:
A G T C C T A G A G T C T G C A C A G T C A T G A T G C C A T G A G C T T G C A
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.669
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.96%
Number of Background Sequences with motif635.5
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets49.4 +/- 26.8bp
Average Position of motif in Background49.9 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-TACGCATGCG-
GTGCGCATGCGC
 A C G T A C G T T C G A G T A C T A C G G T A C G T C A A C G T T C A G G A T C T C A G A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-TACGCATGCG-
CTGCGCATGCGC
 A C G T A C G T T C G A G T A C T A C G G T A C G T C A A C G T T C A G G A T C T C A G A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TACGCATGCG-
TGCGCAGGCGC
 A C G T T C G A G T A C T A C G G T A C G T C A A C G T T C A G G A T C T C A G A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TACGCATGCG
NNCGCGTGNN
 A C G T T C G A G T A C T A C G G T A C G T C A A C G T T C A G G A T C T C A G
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

Gmeb1/MA0615.1/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TACGCATGCG-
NNNTNGTACGTAANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C T A C G G T A C G T C A A C G T T C A G G A T C T C A G A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TACGCATGCG-
NNNTNGTACGTAANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C T A C G G T A C G T C A A C G T T C A G G A T C T C A G A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

Pax6/MA0069.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TACGCATGCG--
TTCACGCATGAGTT
 A C G T A C G T A C G T T C G A G T A C T A C G G T A C G T C A A C G T T C A G G A T C T C A G A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TACGCATGCG
GHATATKCAT---
 A C G T A C G T A C G T A C G T T C G A G T A C T A C G G T A C G T C A A C G T T C A G G A T C T C A G
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TACGCATGCG
--TGCGTG--
 A C G T T C G A G T A C T A C G G T A C G T C A A C G T T C A G G A T C T C A G
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TACGCATGCG
GAATATTCAT---
 A C G T A C G T A C G T A C G T T C G A G T A C T A C G G T A C G T C A A C G T T C A G G A T C T C A G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T