Information for 3-GACCAGCRAAGCCAAG (Motif 12)

T C A G C T G A A G T C G T A C C G T A A T C G A G T C C T G A T C G A G C T A A C T G G A T C A G T C G T C A G T C A A C T G
Reverse Opposite:
A G T C A C G T A C G T T A C G C T A G A G T C C A G T A G C T G A C T A C T G A T G C A C G T C A T G T A C G A G C T A G T C
p-value:1e-9
log p-value:-2.131e+01
Information Content per bp:1.749
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.6 +/- 17.8bp
Average Position of motif in Background55.4 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GACCAGCRAAGCCAAG
------CAAGGHCANV
 T C A G C T G A A G T C G T A C C G T A A T C G A G T C C T G A T C G A G C T A A C T G G A T C A G T C G T C A G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GACCAGCRAAGCCAAG
-------CGTGCCAAG
 T C A G C T G A A G T C G T A C C G T A A T C G A G T C C T G A T C G A G C T A A C T G G A T C A G T C G T C A G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:GACCAGCRAAGCCAAG
---------TGCCAA-
 T C A G C T G A A G T C G T A C C G T A A T C G A G T C C T G A T C G A G C T A A C T G G A T C A G T C G T C A G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GACCAGCRAAGCCAAG
------AAAAGTCAA-
 T C A G C T G A A G T C G T A C C G T A A T C G A G T C C T G A T C G A G C T A A C T G G A T C A G T C G T C A G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GACCAGCRAAGCCAAG-
-------GGTGCCAAGT
 T C A G C T G A A G T C G T A C C G T A A T C G A G T C C T G A T C G A G C T A A C T G G A T C A G T C G T C A G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GACCAGCRAAGCCAAG---
---------TGCCCAGNHW
 T C A G C T G A A G T C G T A C C G T A A T C G A G T C C T G A T C G A G C T A A C T G G A T C A G T C G T C A G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GACCAGCRAAGCCAAG---
--------AAGGCAAGTGT
 T C A G C T G A A G T C G T A C C G T A A T C G A G T C C T G A T C G A G C T A A C T G G A T C A G T C G T C A G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GACCAGCRAAGCCAAG
GCGACCACCGAA------
 A C G T A C G T T C A G C T G A A G T C G T A C C G T A A T C G A G T C C T G A T C G A G C T A A C T G G A T C A G T C G T C A G T C A A C T G
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GACCAGCRAAGCCAAG
---CAGCC--------
 T C A G C T G A A G T C G T A C C G T A A T C G A G T C C T G A T C G A G C T A A C T G G A T C A G T C G T C A G T C A A C T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GACCAGCRAAGCCAAG
GGACCACCCACG-----
 A C G T T C A G C T G A A G T C G T A C C G T A A T C G A G T C C T G A T C G A G C T A A C T G G A T C A G T C G T C A G T C A A C T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T A C G T