Information for 9-CGTTGCTGCT (Motif 18)

A G T C T A C G A G C T A G C T A C T G G T A C G C A T A T C G G A T C G A C T
Reverse Opposite:
C T G A C T A G T A G C C G T A C A T G T G A C T C G A T C G A A G T C T C A G
p-value:1e-8
log p-value:-1.890e+01
Information Content per bp:1.660
Number of Target Sequences with motif104.0
Percentage of Target Sequences with motif11.57%
Number of Background Sequences with motif3059.5
Percentage of Background Sequences with motif6.40%
Average Position of motif in Targets50.6 +/- 26.7bp
Average Position of motif in Background51.3 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CGTTGCTGCT
---NGCTN--
 A G T C T A C G A G C T A G C T A C T G G T A C G C A T A T C G G A T C G A C T
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGTTGCTGCT
CGCAGCTGCG
 A G T C T A C G A G C T A G C T A C T G G T A C G C A T A T C G G A T C G A C T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGTTGCTGCT---
NCCGTTGCTANGNGN
 A C G T A C G T A G T C T A C G A G C T A G C T A C T G G T A C G C A T A T C G G A T C G A C T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGTTGCTGCT-----
AGATGCTRCTRCCHT
 A G T C T A C G A G C T A G C T A C T G G T A C G C A T A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGTTGCTGCT
----GCTTCC
 A G T C T A C G A G C T A G C T A C T G G T A C G C A T A T C G G A T C G A C T
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGTTGCTGCT
----GCTGTG
 A G T C T A C G A G C T A G C T A C T G G T A C G C A T A T C G G A T C G A C T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGTTGCTGCT------
TNNTGCTACTGTNNNN
 A G T C T A C G A G C T A G C T A C T G G T A C G C A T A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGTTGCTGCT------
CNNNGCTACTGTANNN
 A G T C T A C G A G C T A G C T A C T G G T A C G C A T A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGTTGCTGCT---
NNCGTTGCTATGGNN
 A C G T A C G T A G T C T A C G A G C T A G C T A C T G G T A C G C A T A T C G G A T C G A C T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGTTGCTGCT
CNGTCCTCCC
 A G T C T A C G A G C T A G C T A C T G G T A C G C A T A T C G G A T C G A C T
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C