Information for 8-TTCGGTATTTCCT (Motif 16)

A C G T A C G T A G T C C A T G A C T G A C G T C G T A C G A T A C G T A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A C G T A C G T A A C G T C G T A A G T C G A T C A C T G C G T A C G T A
p-value:1e-8
log p-value:-1.910e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 5.4bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.70
Offset:6
Orientation:forward strand
Alignment:TTCGGTATTTCCT---
------ATTTCCTGTN
 A C G T A C G T A G T C C A T G A C T G A C G T C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTCGGTATTTCCT
--GGGGATTTCC-
 A C G T A C G T A G T C C A T G A C T G A C G T C G T A C G A T A C G T A C G T A G T C A G T C A C G T
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TTCGGTATTTCCT---
------ATTTCCTGTN
 A C G T A C G T A G T C C A T G A C T G A C G T C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TTCGGTATTTCCT---
----NNAYTTCCTGHN
 A C G T A C G T A G T C C A T G A C T G A C G T C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTCGGTATTTCCT
--GGGAATTTCC-
 A C G T A C G T A G T C C A T G A C T G A C G T C G T A C G A T A C G T A C G T A G T C A G T C A C G T
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TTCGGTATTTCCT---
------ACTTCCTGNT
 A C G T A C G T A G T C C A T G A C T G A C G T C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

PB0012.1_Elf3_1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTCGGTATTTCCT----
----TTACTTCCTNGTN
 A C G T A C G T A G T C C A T G A C T G A C G T C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TTCGGTATTTCCT---
------ACTTCCTGBT
 A C G T A C G T A G T C C A T G A C T G A C G T C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TTCGGTATTTCCT--
-----CACTTCCTGT
 A C G T A C G T A G T C C A T G A C T G A C G T C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTCGGTATTTCCT
--GGGAATTTCC-
 A C G T A C G T A G T C C A T G A C T G A C G T C G T A C G A T A C G T A C G T A G T C A G T C A C G T
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T