Information for 4-GSGCCGCCATYTT (Motif 5)

A C T G T A G C A T C G A T G C G T A C A C T G G T A C A G T C C G T A A G C T A G C T C G A T A G C T
Reverse Opposite:
C T G A C G T A C T G A C T G A A C G T A C T G A C T G A G T C A C T G A T C G A T G C A T C G T G A C
p-value:1e-13
log p-value:-3.048e+01
Information Content per bp:1.754
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif155.5
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets43.6 +/- 22.7bp
Average Position of motif in Background52.1 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:GSGCCGCCATYTT-
--GCCGCCATCTTG
 A C T G T A G C A T C G A T G C G T A C A C T G G T A C A G T C C G T A A G C T A G C T C G A T A G C T A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:GSGCCGCCATYTT-
--GCNGCCATCTTG
 A C T G T A G C A T C G A T G C G T A C A C T G G T A C A G T C C G T A A G C T A G C T C G A T A G C T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GSGCCGCCATYTT
-GTCCGCCATTA-
 A C T G T A G C A T C G A T G C G T A C A C T G G T A C A G T C C G T A A G C T A G C T C G A T A G C T
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GSGCCGCCATYTT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C T G T A G C A T C G A T G C G T A C A C T G G T A C A G T C C G T A A G C T A G C T C G A T A G C T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GSGCCGCCATYTT-
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C T G T A G C A T C G A T G C G T A C A C T G G T A C A G T C C G T A A G C T A G C T C G A T A G C T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F2/MA0864.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GSGCCGCCATYTT
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A C T G T A G C A T C G A T G C G T A C A C T G G T A C A G T C C G T A A G C T A G C T C G A T A G C T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

E2F3/MA0469.2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GSGCCGCCATYTT-
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C T G T A G C A T C G A T G C G T A C A C T G G T A C A G T C C G T A A G C T A G C T C G A T A G C T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GSGCCGCCATYTT-
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C T G T A G C A T C G A T G C G T A C A C T G G T A C A G T C C G T A A G C T A G C T C G A T A G C T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GSGCCGCCATYTT
----TGCCAA---
 A C T G T A G C A T C G A T G C G T A C A C T G G T A C A G T C C G T A A G C T A G C T C G A T A G C T
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GSGCCGCCATYTT
AGCGCGCC-----
 A C T G T A G C A T C G A T G C G T A C A C T G G T A C A G T C C G T A A G C T A G C T C G A T A G C T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T