Information for 15-CCTGTTGCTCTCC (Motif 20)

A G T C A G T C A C G T T C A G A G C T C G A T A C T G A G T C A C G T A G T C A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G C G T A A C T G C G T A A C T G A G T C C G T A C T G A A G T C C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.823e+01
Information Content per bp:1.937
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.7 +/- 30.0bp
Average Position of motif in Background53.2 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTTGCTCTCC
CCACCTGTTGCAT---
 A C G T A C G T A C G T A G T C A G T C A C G T T C A G A G C T C G A T A C T G A G T C A C G T A G T C A C G T A T G C A G T C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTTGCTCTCC
ANCCACCTGTTGCNC---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T T C A G A G C T C G A T A C T G A G T C A C G T A G T C A C G T A T G C A G T C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTTGCTCTCC
TGACCTTTTGACCTC-
 A C G T A C G T A C G T A G T C A G T C A C G T T C A G A G C T C G A T A C T G A G T C A C G T A G T C A C G T A T G C A G T C
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C A C G T

Spz1/MA0111.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTGTTGCTCTCC
GCTGTTACCCT--
 A G T C A G T C A C G T T C A G A G C T C G A T A C T G A G T C A C G T A G T C A C G T A T G C A G T C
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTTGCTCTCC
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A G T C A G T C A C G T T C A G A G C T C G A T A C T G A G T C A C G T A G T C A C G T A T G C A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCTGTTGCTCTCC--
NCCGTTGCTANGNGN
 A G T C A G T C A C G T T C A G A G C T C G A T A C T G A G T C A C G T A G T C A C G T A T G C A G T C A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCTGTTGCTCTCC-
WCATTTTGKCCTCYT
 A C G T A G T C A G T C A C G T T C A G A G C T C G A T A C T G A G T C A C G T A G T C A C G T A T G C A G T C A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCTGTTGCTCTCC
-CTGTTGCTAGGS
 A G T C A G T C A C G T T C A G A G C T C G A T A C T G A G T C A C G T A G T C A C G T A T G C A G T C
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCTGTTGCTCTCC
CCTGCTGAGH---
 A G T C A G T C A C G T T C A G A G C T C G A T A C T G A G T C A C G T A G T C A C G T A T G C A G T C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

RARA/MA0729.1/Jaspar

Match Rank:10
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------CCTGTTGCTCTCC
CATTGACCTTTTGACCTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T T C A G A G C T C G A T A C T G A G T C A C G T A G T C A C G T A T G C A G T C
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C A C G T