Information for 10-AGWCSCGSGTTAA (Motif 15)

C T G A A C T G C G A T A G T C T A C G A G T C A C T G T A C G A C T G A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T C G A T C G T A C G T A A G T C A T C G A G T C A C T G A T G C A C T G C G T A A G T C A G C T
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.880
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.7 +/- 21.1bp
Average Position of motif in Background52.3 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGWCSCGSGTTAA
AANTCATGCGTGAA
 A C G T C T G A A C T G C G A T A G T C T A C G A G T C A C T G T A C G A C T G A C G T A C G T C G T A C G T A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGWCSCGSGTTAA-------
---CCTTAGTTAACTAAAAT
 C T G A A C T G C G A T A G T C T A C G A G T C A C T G T A C G A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGWCSCGSGTTAA-------
---TGATTGTTAACAGTTGG
 C T G A A C T G C G A T A G T C T A C G A G T C A C T G T A C G A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGWCSCGSGTTAA---
AGAGCGGGGTCAAGTA
 C T G A A C T G C G A T A G T C T A C G A G T C A C T G T A C G A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGWCSCGSGTTAA
-GGCACGTGCC--
 C T G A A C T G C G A T A G T C T A C G A G T C A C T G T A C G A C T G A C G T A C G T C G T A C G T A
A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

PH0126.1_Obox6/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGWCSCGSGTTAA--
AAAAACGGATTATTG
 C T G A A C T G C G A T A G T C T A C G A G T C A C T G T A C G A C T G A C G T A C G T C G T A C G T A A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

PB0081.1_Tcf1_1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGWCSCGSGTTAA------
--NNNTTAGTTAACTNANN
 C T G A A C T G C G A T A G T C T A C G A G T C A C T G T A C G A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGWCSCGSGTTAA
-GTCACGTGNT--
 C T G A A C T G C G A T A G T C T A C G A G T C A C T G T A C G A C T G A C G T A C G T C G T A C G T A
A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGWCSCGSGTTAA----
TGAACCGGATTAATGAA
 C T G A A C T G C G A T A G T C T A C G A G T C A C T G T A C G A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGWCSCGSGTTAA----
TGAACCGGATTAATGAA
 C T G A A C T G C G A T A G T C T A C G A G T C A C T G T A C G A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A