Information for 1-RGSAGAAAARRAASWC (Motif 3)

C T A G A C T G A T G C C G T A A C T G C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A A T C G C G T A A G T C
Reverse Opposite:
A C T G C G A T A T G C A G C T A G C T A G C T A G C T A C G T C G A T A C G T A C G T A G T C A C G T A T C G A G T C A G T C
p-value:1e-16
log p-value:-3.743e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 18.0bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:RGSAGAAAARRAASWC
---AGAAACGAAAGT-
 C T A G A C T G A T G C C G T A A C T G C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A A T C G C G T A A G T C
A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RGSAGAAAARRAASWC
AGCCGAAAAAAAAAT-
 C T A G A C T G A T G C C G T A A C T G C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A A T C G C G T A A G T C
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RGSAGAAAARRAASWC
-ANAGATAAGAA----
 C T A G A C T G A T G C C G T A A C T G C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A A T C G C G T A A G T C
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RGSAGAAAARRAASWC
-NCAGATAAGAANNN-
 C T A G A C T G A T G C C G T A A C T G C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A A T C G C G T A A G T C
A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RGSAGAAAARRAASWC
NNGAGATAAGA-----
 C T A G A C T G A T G C C G T A A C T G C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A A T C G C G T A A G T C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-RGSAGAAAARRAASWC
TACTGGAAAAAAAA---
 A C G T C T A G A C T G A T G C C G T A A C T G C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A A T C G C G T A A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RGSAGAAAARRAASWC--
-GTTAAAAAAAAAAATTA
 C T A G A C T G A T G C C G T A A C T G C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A A T C G C G T A A G T C A C G T A C G T
A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RGSAGAAAARRAASWC
---AGATAAGA-----
 C T A G A C T G A T G C C G T A A C T G C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A A T C G C G T A A G T C
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RGSAGAAAARRAASWC
--NAGATAAGNN----
 C T A G A C T G A T G C C G T A A C T G C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A A T C G C G T A A G T C
A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RGSAGAAAARRAASWC
AAACAGACAAAGGAAT-
 A C G T C T A G A C T G A T G C C G T A A C T G C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A A T C G C G T A A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T