Information for 2-KTCCCAAGRGAGCAGC (Motif 4)

A C G T A G C T A G T C A G T C A G T C C G T A C G T A A C T G C T A G A C T G C G T A A C T G A G T C C T G A C T A G A G T C
Reverse Opposite:
A C T G A G T C A G C T A C T G A G T C A C G T G T A C A G T C A G T C G A C T A C G T C T A G C T A G C T A G C T G A G T C A
p-value:1e-16
log p-value:-3.723e+01
Information Content per bp:1.800
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.0 +/- 23.8bp
Average Position of motif in Background65.9 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:KTCCCAAGRGAGCAGC
-TCCCNNGGGACN---
 A C G T A G C T A G T C A G T C A G T C C G T A C G T A A C T G C T A G A C T G C G T A A C T G A G T C C T G A C T A G A G T C
A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-KTCCCAAGRGAGCAGC
ATTCCCAAGGGAAT---
 A C G T A C G T A G C T A G T C A G T C A G T C C G T A C G T A A C T G C T A G A C T G C G T A A C T G A G T C C T G A C T A G A G T C
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:KTCCCAAGRGAGCAGC----
-----ADGGYAGYAGCATCT
 A C G T A G C T A G T C A G T C A G T C C G T A C G T A A C T G C T A G A C T G C G T A A C T G A G T C C T G A C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:KTCCCAAGRGAGCAGC
----CAAGATGGCGGC
 A C G T A G C T A G T C A G T C A G T C C G T A C G T A A C T G C T A G A C T G C G T A A C T G A G T C C T G A C T A G A G T C
A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:KTCCCAAGRGAGCAGC-
-------GGGAGGACNG
 A C G T A G C T A G T C A G T C A G T C C G T A C G T A A C T G C T A G A C T G C G T A A C T G A G T C C T G A C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:KTCCCAAGRGAGCAGC
-------CGGAGC---
 A C G T A G C T A G T C A G T C A G T C C G T A C G T A A C T G C T A G A C T G C G T A A C T G A G T C C T G A C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-KTCCCAAGRGAGCAGC
GTCCCCAGGGGA-----
 A C G T A C G T A G C T A G T C A G T C A G T C C G T A C G T A A C T G C T A G A C T G C G T A A C T G A G T C C T G A C T A G A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:KTCCCAAGRGAGCAGC
-TCCCAGMCRAGCCCC
 A C G T A G C T A G T C A G T C A G T C C G T A C G T A A C T G C T A G A C T G C G T A A C T G A G T C C T G A C T A G A G T C
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Spz1/MA0111.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:KTCCCAAGRGAGCAGC
-----AGGGTAACAGC
 A C G T A G C T A G T C A G T C A G T C C G T A C G T A A C T G C T A G A C T G C G T A A C T G A G T C C T G A C T A G A G T C
A C G T A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:KTCCCAAGRGAGCAGC
TTGCCATGGCAACC--
 A C G T A G C T A G T C A G T C A G T C C G T A C G T A A C T G C T A G A C T G C G T A A C T G A G T C C T G A C T A G A G T C
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T