Information for 2-CTCGCCGTGGTGTCCG (Motif 4)

A T G C A C G T A G T C T A C G A T G C A G T C A C T G A C G T A C T G A C T G A G C T A C T G G A C T A G T C A G T C C T A G
Reverse Opposite:
A G T C A C T G A C T G C T G A G T A C C T G A T G A C G T A C C G T A T G A C C T A G A T C G A G T C C T A G C G T A A T C G
p-value:1e-12
log p-value:-2.789e+01
Information Content per bp:1.765
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.5 +/- 21.9bp
Average Position of motif in Background43.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCGCCGTGGTGTCCG
-TTGCCATGGCAACN-
 A T G C A C G T A G T C T A C G A T G C A G T C A C T G A C G T A C T G A C T G A G C T A C T G G A C T A G T C A G T C C T A G
A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCGCCGTGGTGTCCG
GTTGCCATGGCAACCG
 A T G C A C G T A G T C T A C G A T G C A G T C A C T G A C G T A C T G A C T G A G C T A C T G G A C T A G T C A G T C C T A G
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTCGCCGTGGTGTCCG
---GCTGTGGTTT---
 A T G C A C G T A G T C T A C G A T G C A G T C A C T G A C G T A C T G A C T G A G C T A C T G G A C T A G T C A G T C C T A G
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RFX4/MA0799.1/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTCGCCGTGGTGTCCG
CGTTGCCATGGCAACG-
 A C G T A T G C A C G T A G T C T A C G A T G C A G T C A C T G A C G T A C T G A C T G A G C T A C T G G A C T A G T C A G T C C T A G
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTCGCCGTGGTGTCCG
GTTGCCATGGCAACM-
 A T G C A C G T A G T C T A C G A T G C A G T C A C T G A C G T A C T G A C T G A G C T A C T G G A C T A G T C A G T C C T A G
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTCGCCGTGGTGTCCG
-TTGCCATGGCAACC-
 A T G C A C G T A G T C T A C G A T G C A G T C A C T G A C G T A C T G A C T G A G C T A C T G G A C T A G T C A G T C C T A G
A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CTCGCCGTGGTGTCCG
------GTGGGCCCCA
 A T G C A C G T A G T C T A C G A T G C A G T C A C T G A C G T A C T G A C T G A G C T A C T G G A C T A G T C A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CTCGCCGTGGTGTCCG-
-----GGTGYTGACAGS
 A T G C A C G T A G T C T A C G A T G C A G T C A C T G A C G T A C T G A C T G A G C T A C T G G A C T A G T C A G T C C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CTCGCCGTGGTGTCCG
------CTGTTTAC--
 A T G C A C G T A G T C T A C G A T G C A G T C A C T G A C G T A C T G A C T G A G C T A C T G G A C T A G T C A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T

RFX3/MA0798.1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CTCGCCGTGGTGTCCG
CGTTGCCATGGCAACG-
 A C G T A T G C A C G T A G T C T A C G A T G C A G T C A C T G A C G T A C T G A C T G A G C T A C T G G A C T A G T C A G T C C T A G
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T