Information for 8-CCTTGCCCAC (Motif 15)

A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C
Reverse Opposite:
C T A G C G A T C T A G A C T G C T A G A G T C C G T A C G T A A C T G A C T G
p-value:1e-6
log p-value:-1.605e+01
Information Content per bp:1.923
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif99.1
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets55.6 +/- 30.0bp
Average Position of motif in Background51.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCTTGCCCAC-
--ATGCCCACC
 A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCTTGCCCAC--
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGCCCAC
KGCCCTTCCCCA-
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCTTGCCCAC-
--CTGCCCGCA
 A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C A C G T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGCCCAC
TGACCTTGACCT-
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGCCCAC
TGACCTTGACCT-
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGCCCAC
BNTGDCCTTG-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGCCCAC
NNACTTGCCTT-
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTTGCCCAC-
GCCACRCCCACY
 A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C A C G T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTTGCCCAC
CCCCTCCCCCAC
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C