Information for 7-TGGAGGGHGCTGGGGT (Motif 8)

A C G T A C T G A C T G G T C A A C T G A C T G C A T G G A C T A C T G A G T C A C G T C T A G C T A G A C T G C T A G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A G T C C G T A A C T G A G T C C G T A G T A C A G T C G T A C A C G T A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.141e+01
Information Content per bp:1.836
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.9 +/- 29.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGGAGGGHGCTGGGGT
---CTGTTGCTAGGS-
 A C G T A C T G A C T G G T C A A C T G A C T G C A T G G A C T A C T G A G T C A C G T C T A G C T A G A C T G C T A G A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGGAGGGHGCTGGGGT-
--NNCGTTGCTATGGNN
 A C G T A C T G A C T G G T C A A C T G A C T G C A T G G A C T A C T G A G T C A C G T C T A G C T A G A C T G C T A G A C G T A C G T
A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGGAGGGHGCTGGGGT
-GGCGGGGGCGGGGG-
 A C G T A C T G A C T G G T C A A C T G A C T G C A T G G A C T A C T G A G T C A C G T C T A G C T A G A C T G C T A G A C G T
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TGGAGGGHGCTGGGGT--
-------TGCTGTGATTT
 A C G T A C T G A C T G G T C A A C T G A C T G C A T G G A C T A C T G A G T C A C G T C T A G C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGGGHGCTGGGGT-----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C T G A C T G G T C A A C T G A C T G C A T G G A C T A C T G A G T C A C G T C T A G C T A G A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGGAGGGHGCTGGGGT---
----KGTTGCTAGGMAACA
 A C G T A C T G A C T G G T C A A C T G A C T G C A T G G A C T A C T G A G T C A C G T C T A G C T A G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:TGGAGGGHGCTGGGGT--
--------GCTGTGGTTT
 A C G T A C T G A C T G G T C A A C T G A C T G C A T G G A C T A C T G A G T C A C G T C T A G C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TGGAGGGHGCTGGGGT
-------NGCTN----
 A C G T A C T G A C T G G T C A A C T G A C T G C A T G G A C T A C T G A G T C A C G T C T A G C T A G A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGGGHGCTGGGGT
NTCGGTGGTCGC------
 A C G T A C G T A C G T A C T G A C T G G T C A A C T G A C T G C A T G G A C T A C T G A G T C A C G T C T A G C T A G A C T G C T A G A C G T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TGGAGGGHGCTGGGGT-
--NCCGTTGCTANGNGN
 A C G T A C T G A C T G G T C A A C T G A C T G C A T G G A C T A C T G A G T C A C G T C T A G C T A G A C T G C T A G A C G T A C G T
A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G