Information for 17-TGAWGGGMCACMAGAG (Motif 33)

A C G T A C T G C G T A C G A T A C T G A C T G A C T G G T C A A G T C C G T A A G T C G T A C C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C G T A C A G T C G C A T A C G T A G T C C G T A
p-value:1e-4
log p-value:-9.809e+00
Information Content per bp:1.908
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.5 +/- 5.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TGAWGGGMCACMAGAG
------GTCACATGAY
 A C G T A C T G C G T A C G A T A C T G A C T G A C T G G T C A A G T C C G T A A G T C G T A C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TGAWGGGMCACMAGAG
-CAAAGGTCAAGGG--
 A C G T A C T G C G T A C G A T A C T G A C T G A C T G G T C A A G T C C G T A A G T C G T A C C G T A A C T G C G T A A C T G
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGAWGGGMCACMAGAG
NTNNNGGGGTCANGNNN-
 A C G T A C G T A C G T A C T G C G T A C G A T A C T G A C T G A C T G G T C A A G T C C G T A A G T C G T A C C G T A A C T G C G T A A C T G
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TGAWGGGMCACMAGAG--------
----TGGCCACCAGGTGGCACTNT
 A C G T A C T G C G T A C G A T A C T G A C T G A C T G G T C A A G T C C G T A A G T C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.49
Offset:4
Orientation:forward strand
Alignment:TGAWGGGMCACMAGAG-------
----TGGCCACCAGGGGGCGCTA
 A C G T A C T G C G T A C G A T A C T G A C T G A C T G G T C A A G T C C G T A A G T C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TGAWGGGMCACMAGAG
TCTCAAAGGTCACGAG--
 A C G T A C G T A C G T A C T G C G T A C G A T A C T G A C T G A C T G G T C A A G T C C G T A A G T C G T A C C G T A A C T G C G T A A C T G
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TGAWGGGMCACMAGAG
GGCGAGGGGTCAAGGGC-
 A C G T A C G T A C G T A C T G C G T A C G A T A C T G A C T G A C T G G T C A A G T C C G T A A G T C G T A C C G T A A C T G C G T A A C T G
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TGAWGGGMCACMAGAG
TCTCAAAGGTCACCTG--
 A C G T A C G T A C G T A C T G C G T A C G A T A C T G A C T G A C T G G T C A A G T C C G T A A G T C G T A C C G T A A C T G C G T A A C T G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:9
Score:0.48
Offset:3
Orientation:forward strand
Alignment:TGAWGGGMCACMAGAG----
---AAGGTCACGAAAGGTCA
 A C G T A C T G C G T A C G A T A C T G A C T G A C T G G T C A A G T C C G T A A G T C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C G A A T C G A C T G A C G T G T A C T C G A G T A C A T C G T C G A T C G A T C G A A C T G A C T G G C A T G A T C T C G A

CREB3/MA0638.1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---TGAWGGGMCACMAGAG
NGATGACGTGGCAN-----
 A C G T A C G T A C G T A C G T A C T G C G T A C G A T A C T G A C T G A C T G G T C A A G T C C G T A A G T C G T A C C G T A A C T G C G T A A C T G
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T