Information for 9-ACACGYGTTC (Motif 31)

C T G A A G T C C G T A A T G C A C T G A G T C A C T G C G A T C G A T A G T C
Reverse Opposite:
A C T G C G T A C G T A A G T C C T A G A G T C A T C G A C G T A C T G A G C T
p-value:1e-6
log p-value:-1.394e+01
Information Content per bp:1.856
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.80%
Number of Background Sequences with motif466.6
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets44.8 +/- 30.7bp
Average Position of motif in Background49.3 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-ACACGYGTTC
AACACGTGTT-
 A C G T C T G A A G T C C G T A A T G C A C T G A G T C A C T G C G A T C G A T A G T C
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACACGYGTTC
-CACGTGNT-
 C T G A A G T C C G T A A T G C A C T G A G T C A C T G C G A T C G A T A G T C
A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ACACGYGTTC
GGCACGCGTC-
 A C G T C T G A A G T C C G T A A T G C A C T G A G T C A C T G C G A T C G A T A G T C
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ACACGYGTTC
AACAGGTGNT-
 A C G T C T G A A G T C C G T A A T G C A C T G A G T C A C T G C G A T C G A T A G T C
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACACGYGTTC
-CACGTGBN-
 C T G A A G T C C G T A A T G C A C T G A G T C A C T G C G A T C G A T A G T C
A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ACACGYGTTC
NACACGTGCN-
 A C G T C T G A A G T C C G T A A T G C A C T G A G T C A C T G C G A T C G A T A G T C
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACACGYGTTC-
ACCACGTGGTNN
 A C G T C T G A A G T C C G T A A T G C A C T G A G T C A C T G C G A T C G A T A G T C A C G T
T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T

MAX/MA0058.3/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ACACGYGTTC
NNCACGTGGT-
 A C G T C T G A A G T C C G T A A T G C A C T G A G T C A C T G C G A T C G A T A G T C
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ACACGYGTTC
GCACGTGT--
 C T G A A G T C C G T A A T G C A C T G A G T C A C T G C G A T C G A T A G T C
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ACACGYGTTC
-CACGTG---
 C T G A A G T C C G T A A T G C A C T G A G T C A C T G C G A T C G A T A G T C
A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T