Information for 14-CATCCTAACCATC (Motif 29)

A T G C C T G A A C G T G T A C A G T C C G A T T G C A C G T A A G T C A G T C G T C A A C G T A T G C
Reverse Opposite:
A T C G G T C A A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G T C G A A G C T A T C G
p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.763
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets33.7 +/- 22.8bp
Average Position of motif in Background46.3 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CATCCTAACCATC
-NNACTTACCTN-
 A T G C C T G A A C G T G T A C A G T C C G A T T G C A C G T A A G T C A G T C G T C A A C G T A T G C
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CATCCTAACCATC--
----CTAATCCTCTT
 A T G C C T G A A C G T G T A C A G T C C G A T T G C A C G T A A G T C A G T C G T C A A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CATCCTAACCATC
AGCAACAGCCGCACC---
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A A C G T G T A C A G T C C G A T T G C A C G T A A G T C A G T C G T C A A C G T A T G C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CATCCTAACCATC
NAGGTCACNNTGACC---
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A A C G T G T A C A G T C C G A T T G C A C G T A A G T C A G T C G T C A A C G T A T G C
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CATCCTAACCATC
AGGNCANNGTGACCT--
 A C G T A C G T A C G T A C G T A T G C C T G A A C G T G T A C A G T C C G A T T G C A C G T A A G T C A G T C G T C A A C G T A T G C
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATCCTAACCATC
-GGCCACACCCAN
 A T G C C T G A A C G T G T A C A G T C C G A T T G C A C G T A A G T C A G T C G T C A A C G T A T G C
A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CATCCTAACCATC
---CCTCACCTG-
 A T G C C T G A A C G T G T A C A G T C C G A T T G C A C G T A A G T C A G T C G T C A A C G T A T G C
A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T

ESR1/MA0112.3/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CATCCTAACCATC
CAGGTCACCGTGACCTT-
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A A C G T G T A C A G T C C G A T T G C A C G T A A G T C A G T C G T C A A C G T A T G C
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CATCCTAACCATC
---CCTAATCCGC
 A T G C C T G A A C G T G T A C A G T C C G A T T G C A C G T A A G T C A G T C G T C A A C G T A T G C
A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CATCCTAACCATC
---GCTAATCC--
 A T G C C T G A A C G T G T A C A G T C C G A T T G C A C G T A A G T C A G T C G T C A A C G T A T G C
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T