Information for 11-ACATGCTTSTARCATG (Motif 17)

G T C A A G T C T G C A A C G T A C T G A G T C A C G T A C G T A T G C A G C T G T C A T C G A G T A C C T G A A C G T A C T G
Reverse Opposite:
A G T C C G T A A G C T A C T G A G C T A C G T T C G A T A C G G T C A C G T A A C T G G T A C C G T A A C G T A C T G A C G T
p-value:1e-8
log p-value:-1.865e+01
Information Content per bp:1.797
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 22.8bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCTTSTARCATG
NNACTTGCCTT-------
 A C G T A C G T G T C A A G T C T G C A A C G T A C T G A G T C A C G T A C G T A T G C A G C T G T C A T C G A G T A C C T G A A C G T A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ACATGCTTSTARCATG
GATAACATCCTAGTAG----
 A C G T A C G T A C G T A C G T G T C A A G T C T G C A A C G T A C T G A G T C A C G T A C G T A T G C A G C T G T C A T C G A G T A C C T G A A C G T A C T G
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.51
Offset:1
Orientation:forward strand
Alignment:ACATGCTTSTARCATG
-CAAGCTT--------
 G T C A A G T C T G C A A C G T A C T G A G T C A C G T A C G T A T G C A G C T G T C A T C G A G T A C C T G A A C G T A C T G
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACATGCTTSTARCATG
RTACGTGC----------
 A C G T A C G T G T C A A G T C T G C A A C G T A C T G A G T C A C G T A C G T A T G C A G C T G T C A T C G A G T A C C T G A A C G T A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:ACATGCTTSTARCATG
----GCTTCC------
 G T C A A G T C T G C A A C G T A C T G A G T C A C G T A C G T A T G C A G C T G T C A T C G A G T A C C T G A A C G T A C T G
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:ACATGCTTSTARCATG
ACTTGCTACCTACACC
 G T C A A G T C T G C A A C G T A C T G A G T C A C G T A C G T A T G C A G C T G T C A T C G A G T A C C T G A A C G T A C T G
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCTTSTARCATG
NCACCTGTN---------
 A C G T A C G T G T C A A G T C T G C A A C G T A C T G A G T C A C G T A C G T A T G C A G C T G T C A T C G A G T A C C T G A A C G T A C T G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:forward strand
Alignment:ACATGCTTSTARCATG
ACATGCTACCTAATAC
 G T C A A G T C T G C A A C G T A C T G A G T C A C G T A C G T A T G C A G C T G T C A T C G A G T A C C T G A A C G T A C T G
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

MAX::MYC/MA0059.1/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---ACATGCTTSTARCATG
ACCACGTGCTC--------
 A C G T A C G T A C G T G T C A A G T C T G C A A C G T A C T G A G T C A C G T A C G T A T G C A G C T G T C A T C G A G T A C C T G A A C G T A C T G
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--ACATGCTTSTARCATG
GGACGTGC----------
 A C G T A C G T G T C A A G T C T G C A A C G T A C T G A G T C A C G T A C G T A T G C A G C T G T C A T C G A G T A C C T G A A C G T A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T