Information for 3-CTCGCAGCTGCCC (Motif 13)

A G T C G A C T A G T C C T A G A G T C C G T A A T C G A G T C A G C T A C T G A G T C A G T C T A G C
Reverse Opposite:
A T C G A C T G A C T G G T A C C T G A A C T G A T G C A C G T A C T G A G T C A C T G C G T A A C T G
p-value:1e-8
log p-value:-1.932e+01
Information Content per bp:1.861
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.4 +/- 26.5bp
Average Position of motif in Background53.8 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CTCGCAGCTGCCC
--CGCAGCTGCG-
 A G T C G A C T A G T C C T A G A G T C C G T A A T C G A G T C A G C T A C T G A G T C A G T C T A G C
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTCGCAGCTGCCC
-NNACAGCTGC--
 A G T C G A C T A G T C C T A G A G T C C G T A A T C G A G T C A G C T A C T G A G T C A G T C T A G C
A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTCGCAGCTGCCC---
CTCAGCAGCTGCTACTG
 A C G T A G T C G A C T A G T C C T A G A G T C C G T A A T C G A G T C A G C T A C T G A G T C A G T C T A G C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTCGCAGCTGCCC--
--TGCAGCTGTCCCT
 A G T C G A C T A G T C C T A G A G T C C G T A A T C G A G T C A G C T A C T G A G T C A G T C T A G C A C G T A C G T
A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTCGCAGCTGCCC
-NNGCAGCTGTC-
 A G T C G A C T A G T C C T A G A G T C C G T A A T C G A G T C A G C T A C T G A G T C A G T C T A G C
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTCGCAGCTGCCC-
--AGCAGCTGCTNN
 A G T C G A C T A G T C C T A G A G T C C G T A A T C G A G T C A G C T A C T G A G T C A G T C T A G C A C G T
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTCGCAGCTGCCC
--AGCAGCTGCT-
 A G T C G A C T A G T C C T A G A G T C C G T A A T C G A G T C A G C T A C T G A G T C A G T C T A G C
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTCGCAGCTGCCC
---NCAGCTGCTG
 A G T C G A C T A G T C C T A G A G T C C G T A A T C G A G T C A G C T A C T G A G T C A G T C T A G C
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTCGCAGCTGCCC
-SNGCACCTGCHS
 A G T C G A C T A G T C C T A G A G T C C G T A A T C G A G T C A G C T A C T G A G T C A G T C T A G C
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTCGCAGCTGCCC
-TCACACCT----
 A G T C G A C T A G T C C T A G A G T C C G T A A T C G A G T C A G C T A C T G A G T C A G T C T A G C
A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T