Information for 2-GSAYCWRACT (Motif 6)

A C T G A T C G C G T A A G T C A G T C C G T A C T A G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C C G A T A C T G C T A G A C G T A T G C G T A C
p-value:1e-6
log p-value:-1.403e+01
Information Content per bp:1.843
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif14.81%
Number of Background Sequences with motif99.1
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets43.0 +/- 22.4bp
Average Position of motif in Background47.9 +/- 39.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GSAYCWRACT
RGGGCACTAACY
 A C G T A C G T A C T G A T C G C G T A A G T C A G T C C G T A C T A G C G T A A G T C A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GSAYCWRACT-
---BCAGACWA
 A C T G A T C G C G T A A G T C A G T C C G T A C T A G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GSAYCWRACT--------
-TACGAGACTCCTCTAAC
 A C T G A T C G C G T A A G T C A G T C C G T A C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GSAYCWRACT-
---CCAGACAG
 A C T G A T C G C G T A A G T C A G T C C G T A C T A G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GSAYCWRACT--
NNGCACCTTTCTCC
 A C G T A C G T A C T G A T C G C G T A A G T C A G T C C G T A C T A G C G T A A G T C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GSAYCWRACT---
---CCAGACRSVB
 A C T G A T C G C G T A A G T C A G T C C G T A C T A G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

GLI2/MA0734.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GSAYCWRACT-
GCGACCACACTG
 A C G T A C T G A T C G C G T A A G T C A G T C C G T A C T A G C G T A A G T C A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GSAYCWRACT
TGGAACAGMA-
 A C G T A C T G A T C G C G T A A G T C A G T C C G T A C T A G C G T A A G T C A C G T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GSAYCWRACT-----
CAAATCCAGACATCACA
 A C G T A C G T A C T G A T C G C G T A A G T C A G T C C G T A C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GSAYCWRACT
TACACCTGTC-
 A C G T A C T G A T C G C G T A A G T C A G T C C G T A C T A G C G T A A G T C A C G T
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T