Information for 5-GACTACTTTACAA (Motif 11)

A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C G T A G T C
p-value:1e-3
log p-value:-7.238e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets83.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACTACTTTACAA--
ATAACCACTTGAAAATT
 A C G T A C G T A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PH0004.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GACTACTTTACAA-
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GACTACTTTACAA-
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GACTACTTTACAA
TTTTACGACTTTCCAT
 A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C C G T A C G T A
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GACTACTTTACAA
TACGAGACTCCTCTAAC-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C C G T A C G T A
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GACTACTTTACAA--
ANNNCTAGTTAACNGNN
 A C G T A C G T A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GACTACTTTACAA-
----NTTTTACGAC
 A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GACTACTTTACAA-----
-NNNATTTTACGACNNTN
 A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GACTACTTTACAA-
TAAGCCACTTGAAATT
 A C G T A C G T A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PH0116.1_Nkx2-9/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GACTACTTTACAA
NATTTAAGTACTTNAAA-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C C G T A C G T A
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A A C G T