Information for 4-CCCACACTCA (Motif 10)

G T A C A G T C G T A C C G T A A G T C C G T A A G T C C G A T A G T C C G T A
Reverse Opposite:
A C G T C T A G C G T A A C T G A C G T A C T G A C G T A C T G A C T G A C T G
p-value:1e-3
log p-value:-7.289e+00
Information Content per bp:1.891
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif53.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets68.5 +/- 27.3bp
Average Position of motif in Background39.5 +/- 39.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CCCACACTCA
GCCACACCCA
 G T A C A G T C G T A C C G T A A G T C C G T A A G T C C G A T A G T C C G T A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCCACACTCA-
GGCCACACCCAN
 A C G T G T A C A G T C G T A C C G T A A G T C C G T A A G T C C G A T A G T C C G T A A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Klf1/MA0493.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCCACACTCA
GGCCACACCCA
 A C G T G T A C A G T C G T A C C G T A A G T C C G T A A G T C C G A T A G T C C G T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCCACACTCA-
-MRSCACTYAA
 G T A C A G T C G T A C C G T A A G T C C G T A A G T C C G A T A G T C C G T A A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCCACACTCA
NWAACCACADNN-
 A C G T A C G T A C G T G T A C A G T C G T A C C G T A A G T C C G T A A G T C C G A T A G T C C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCCACACTCA
CRCCCACGCA--
 A C G T A C G T G T A C A G T C G T A C C G T A A G T C C G T A A G T C C G A T A G T C C G T A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCCACACTCA-
--ACCACTTAA
 G T A C A G T C G T A C C G T A A G T C C G T A A G T C C G A T A G T C C G T A A C G T
A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCCACACTCA
YCCGCCCACGCN--
 A C G T A C G T A C G T A C G T G T A C A G T C G T A C C G T A A G T C C G T A A G T C C G A T A G T C C G T A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCCACACTCA-
-AASCACTCAA
 G T A C A G T C G T A C C G T A A G T C C G T A A G T C C G A T A G T C C G T A A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCCACACTCA-
--ACCACTTAA
 G T A C A G T C G T A C C G T A A G T C C G T A A G T C C G A T A G T C C G T A A C G T
A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A