| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.302e+00 | 0.2453 | 50.0 | 10.04% | 2340.1 | 6.22% | motif file (matrix) |
svg |
| 2 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.238e+00 | 0.2453 | 44.0 | 8.84% | 1989.1 | 5.29% | motif file (matrix) |
svg |
| 3 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-2 | -6.668e+00 | 0.2453 | 97.0 | 19.48% | 5435.5 | 14.44% | motif file (matrix) |
svg |
| 4 |
| OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer | 1e-2 | -6.280e+00 | 0.2453 | 7.0 | 1.41% | 129.8 | 0.34% | motif file (matrix) |
svg |
| 5 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.078e+00 | 0.2453 | 53.0 | 10.64% | 2669.3 | 7.09% | motif file (matrix) |
svg |
| 6 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.914e+00 | 0.2453 | 35.0 | 7.03% | 1591.2 | 4.23% | motif file (matrix) |
svg |
| 7 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.877e+00 | 0.2453 | 69.0 | 13.86% | 3719.9 | 9.88% | motif file (matrix) |
svg |
| 8 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.213e+00 | 0.2478 | 75.0 | 15.06% | 4224.9 | 11.23% | motif file (matrix) |
svg |
| 9 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.049e+00 | 0.2595 | 40.0 | 8.03% | 1991.3 | 5.29% | motif file (matrix) |
svg |
| 10 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.887e+00 | 0.2745 | 26.0 | 5.22% | 1164.8 | 3.10% | motif file (matrix) |
svg |
