Information for 4-CMCKGGTGCCACA (Motif 8)

T G A C G T A C A G T C C A T G A C T G T C A G G C A T A T C G T G A C A T G C C G T A T A G C C G T A
Reverse Opposite:
C G A T A C T G A C G T A T C G A C T G T A G C C G T A A G T C G T A C G T A C C T A G A C T G A C T G
p-value:1e-9
log p-value:-2.197e+01
Information Content per bp:1.689
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif221.1
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets51.9 +/- 26.7bp
Average Position of motif in Background47.6 +/- 43.9bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CMCKGGTGCCACA-
----GGTGCCAAGT
 T G A C G T A C A G T C C A T G A C T G T C A G G C A T A T C G T G A C A T G C C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CMCKGGTGCCACA
----CGTGCCAAG
 T G A C G T A C A G T C C A T G A C T G T C A G G C A T A T C G T G A C A T G C C G T A T A G C C G T A
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CMCKGGTGCCACA---
----NWAACCACADNN
 T G A C G T A C A G T C C A T G A C T G T C A G G C A T A T C G T G A C A T G C C G T A T A G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CMCKGGTGCCACA-
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T T G A C G T A C A G T C C A T G A C T G T C A G G C A T A T C G T G A C A T G C C G T A T A G C C G T A A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CMCKGGTGCCACA-
-----ATGCCAACC
 T G A C G T A C A G T C C A T G A C T G T C A G G C A T A T C G T G A C A T G C C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CMCKGGTGCCACA
---AGGTGTCA--
 T G A C G T A C A G T C C A T G A C T G T C A G G C A T A T C G T G A C A T G C C G T A T A G C C G T A
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CMCKGGTGCCACA--
---AGGTGHCAGACA
 T G A C G T A C A G T C C A T G A C T G T C A G G C A T A T C G T G A C A T G C C G T A T A G C C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CMCKGGTGCCACA-
----KTTCACACCT
 T G A C G T A C A G T C C A T G A C T G T C A G G C A T A T C G T G A C A T G C C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CMCKGGTGCCACA
--TGGGGCCCAC-
 T G A C G T A C A G T C C A T G A C T G T C A G G C A T A T C G T G A C A T G C C G T A T A G C C G T A
A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CMCKGGTGCCACA---
---AGGTGNCAGACAG
 T G A C G T A C A G T C C A T G A C T G T C A G G C A T A T C G T G A C A T G C C G T A T A G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G