Information for 4-TGYRCCCTGCTGTCCC (Motif 6)

A C G T A T C G A G T C C T A G A T G C A T G C G T A C C G A T A C T G A G T C C G A T A C T G A C G T A G T C A G T C A T G C
Reverse Opposite:
A T C G A C T G C T A G T G C A A G T C C G T A A C T G G T A C C G T A A C T G A T C G A T C G A G T C C T A G A T G C C G T A
p-value:1e-11
log p-value:-2.644e+01
Information Content per bp:1.832
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.4 +/- 28.4bp
Average Position of motif in Background38.7 +/- 1.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGYRCCCTGCTGTCCC
GGCCYCCTGCTGDGH-
 A C G T A T C G A G T C C T A G A T G C A T G C G T A C C G A T A C T G A G T C C G A T A C T G A C G T A G T C A G T C A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGYRCCCTGCTGTCCC
--CCCCCTGCTGTG--
 A C G T A T C G A G T C C T A G A T G C A T G C G T A C C G A T A C T G A G T C C G A T A C T G A C G T A G T C A G T C A T G C
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGYRCCCTGCTGTCCC-
--NNTCCTGCTGTGNNN
 A C G T A T C G A G T C C T A G A T G C A T G C G T A C C G A T A C T G A G T C C G A T A C T G A C G T A G T C A G T C A T G C A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TGYRCCCTGCTGTCCC
-----CCTGCTGAGH-
 A C G T A T C G A G T C C T A G A T G C A T G C G T A C C G A T A C T G A G T C C G A T A C T G A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGYRCCCTGCTGTCCC-
--TCNCCTGCTGNGNNN
 A C G T A T C G A G T C C T A G A T G C A T G C G T A C C G A T A C T G A G T C C G A T A C T G A C G T A G T C A G T C A T G C A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGYRCCCTGCTGTCCC-
--TNTCCTGCTGTGNNG
 A C G T A T C G A G T C C T A G A T G C A T G C G T A C C G A T A C T G A G T C C G A T A C T G A C G T A G T C A G T C A T G C A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TGYRCCCTGCTGTCCC-
-------TGCTGACTCA
 A C G T A T C G A G T C C T A G A T G C A T G C G T A C C G A T A C T G A G T C C G A T A C T G A C G T A G T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGYRCCCTGCTGTCCC
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A T C G A G T C C T A G A T G C A T G C G T A C C G A T A C T G A G T C C G A T A C T G A C G T A G T C A G T C A T G C
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TGYRCCCTGCTGTCCC
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C T A G A T G C A T G C G T A C C G A T A C T G A G T C C G A T A C T G A C G T A G T C A G T C A T G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGYRCCCTGCTGTCCC
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C T A G A T G C A T G C G T A C C G A T A C T G A G T C C G A T A C T G A C G T A G T C A G T C A T G C
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A