Information for 20-GCTGGTCAGT (Motif 43)

A T C G G T A C C G A T C A T G A T C G G A C T G T A C G T C A A T C G C G A T
Reverse Opposite:
G C T A T A G C C A G T C A T G C T G A T A G C G T A C G C T A A C T G A T G C
p-value:1e-3
log p-value:-8.903e+00
Information Content per bp:1.678
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif8.03%
Number of Background Sequences with motif1612.5
Percentage of Background Sequences with motif4.28%
Average Position of motif in Targets57.6 +/- 29.6bp
Average Position of motif in Background49.7 +/- 39.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGTCAGT
NGCTN------
 A C G T A T C G G T A C C G A T C A T G A T C G G A C T G T A C G T C A A T C G C G A T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCTGGTCAGT
WDNCTGGGCA--
 A C G T A C G T A T C G G T A C C G A T C A T G A T C G G A C T G T A C G T C A A T C G C G A T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCTGGTCAGT
NAACAGCTGG-----
 A C G T A C G T A C G T A C G T A C G T A T C G G T A C C G A T C A T G A T C G G A C T G T A C G T C A A T C G C G A T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGTCAGT
HCAGCTGDTN---
 A C G T A C G T A C G T A T C G G T A C C G A T C A T G A T C G G A C T G T A C G T C A A T C G C G A T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTGGTCAGT--
-CAGGTAAGTAT
 A T C G G T A C C G A T C A T G A T C G G A C T G T A C G T C A A T C G C G A T A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCTGGTCAGT
NCAGCTGCTG---
 A C G T A C G T A C G T A T C G G T A C C G A T C A T G A T C G G A C T G T A C G T C A A T C G C G A T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTGGTCAGT
--AGGTCA--
 A T C G G T A C C G A T C A T G A T C G G A C T G T A C G T C A A T C G C G A T
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGTCAGT
CAGCTGNT----
 A C G T A C G T A T C G G T A C C G A T C A T G A T C G G A C T G T A C G T C A A T C G C G A T
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCTGGTCAGT
ATCAGCTGTT----
 A C G T A C G T A C G T A C G T A T C G G T A C C G A T C A T G A T C G G A C T G T A C G T C A A T C G C G A T
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCTGGTCAGT
NNAGCAGCTGCT----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C C G A T C A T G A T C G G A C T G T A C G T C A A T C G C G A T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T