Information for 24-GTCACGCGTCGTA (Motif 41)

A C T G A C G T A G T C C G T A A G T C C T A G A G T C A C T G A C G T A G T C A T C G A C G T C G T A
Reverse Opposite:
A C G T C G T A A T G C A C T G C G T A G T A C A C T G A G T C A C T G A C G T A C T G C G T A A G T C
p-value:1e-4
log p-value:-9.354e+00
Information Content per bp:1.944
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 25.5bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTCACGCGTCGTA
GTGCCACGCGACTG-
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C C T A G A G T C A C T G A C G T A G T C A T C G A C G T C G T A
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T

Hes1/MA1099.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTCACGCGTCGTA
GGCACGCGTC---
 A C T G A C G T A G T C C G T A A G T C C T A G A G T C A C T G A C G T A G T C A T C G A C G T C G T A
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTCACGCGTCGTA
GGTCACGTGG----
 A C G T A C T G A C G T A G T C C G T A A G T C C T A G A G T C A C T G A C G T A G T C A T C G A C G T C G T A
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTCACGCGTCGTA
AGTCACGC------
 A C G T A C T G A C G T A G T C C G T A A G T C C T A G A G T C A C T G A C G T A G T C A T C G A C G T C G T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCACGCGTCGTA-
GTCACGCTCNCTGA
 A C T G A C G T A G T C C G T A A G T C C T A G A G T C A C T G A C G T A G T C A T C G A C G T C G T A A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCACGCGTCGTA
GTCACATGAY---
 A C T G A C G T A G T C C G T A A G T C C T A G A G T C A C T G A C G T A G T C A T C G A C G T C G T A
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCACGCGTCGTA
GGTCACGTGC----
 A C G T A C T G A C G T A G T C C G T A A G T C C T A G A G T C A C T G A C G T A G T C A T C G A C G T C G T A
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTCACGCGTCGTA
--CACGCA-----
 A C T G A C G T A G T C C G T A A G T C C T A G A G T C A C T G A C G T A G T C A T C G A C G T C G T A
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTCACGCGTCGTA
GACACGTGCC---
 A C T G A C G T A G T C C G T A A G T C C T A G A G T C A C T G A C G T A G T C A T C G A C G T C G T A
C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGCGTCGTA
GGTCACGTGGC---
 A C G T A C T G A C G T A G T C C G T A A G T C C T A G A G T C A C T G A C G T A G T C A T C G A C G T C G T A
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T