Information for 18-GGTAGTAGCC (Motif 40)

A C T G C T A G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C A C G T C G T A A G T C A C G T G T C A A G T C A G T C
p-value:1e-4
log p-value:-9.457e+00
Information Content per bp:1.917
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.2 +/- 28.4bp
Average Position of motif in Background37.8 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGTAGTAGCC---
ADGGYAGYAGCATCT
 A C G T A C G T A C T G C T A G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGTAGTAGCC---
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C T G C T A G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGTAGTAGCC---
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C T G C T A G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTAGTAGCC---
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C T G C T A G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

ZBTB7A/MA0750.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTAGTAGCC
TCGGTGGTCGCN
 A C G T A C G T A C T G C T A G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGTAGTAGCC---
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C T G C T A G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PH0139.1_Pitx3/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGTAGTAGCC---
AGGGGGATTAGCTGCC
 A C G T A C G T A C G T A C T G C T A G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGTAGTAGCC
AGGGTAACAGC-
 A C G T A C G T A C T G C T A G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GGTAGTAGCC-
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGTAGTAGCC
NTCGGTGGTCGC-
 A C G T A C G T A C G T A C T G C T A G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T