Information for 20-RTGVGGGATCTTG (Motif 38)

T C G A A C G T C T A G T C A G C T A G A C T G A C T G C G T A A C G T A T G C A C G T A C G T A T C G
Reverse Opposite:
A T G C C G T A T C G A A T C G C G T A C G A T A G T C A G T C A G T C A G C T A G T C G T C A A G C T
p-value:1e-5
log p-value:-1.180e+01
Information Content per bp:1.771
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.2 +/- 21.8bp
Average Position of motif in Background34.1 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0025.1_Glis2_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--RTGVGGGATCTTG-
NTNTGGGGGGTCNNNA
 A C G T A C G T T C G A A C G T C T A G T C A G C T A G A C T G A C T G C G T A A C G T A T G C A C G T A C G T A T C G A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:RTGVGGGATCTTG
--NRRGGGTCTT-
 T C G A A C G T C T A G T C A G C T A G A C T G A C T G C G T A A C G T A T G C A C G T A C G T A T C G
A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----RTGVGGGATCTTG
GCTTCGTGGGGGGTCT--
 A C G T A C G T A C G T A C G T A C G T T C G A A C G T C T A G T C A G C T A G A C T G A C T G C G T A A C G T A T G C A C G T A C G T A T C G
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:RTGVGGGATCTTG
----NGGATTAN-
 T C G A A C G T C T A G T C A G C T A G A C T G A C T G C G T A A C G T A T G C A C G T A C G T A T C G
A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----RTGVGGGATCTTG
NNNNATGCGGGTNNNN-
 A C G T A C G T A C G T A C G T T C G A A C G T C T A G T C A G C T A G A C T G A C T G C G T A A C G T A T G C A C G T A C G T A T C G
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----RTGVGGGATCTTG
CTTCGTGGGGGGTC---
 A C G T A C G T A C G T A C G T T C G A A C G T C T A G T C A G C T A G A C T G A C T G C G T A A C G T A T G C A C G T A C G T A T C G
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RTGVGGGATCTTG
TATGCGGGTA----
 A C G T T C G A A C G T C T A G T C A G C T A G A C T G A C T G C G T A A C G T A T G C A C G T A C G T A T C G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-RTGVGGGATCTTG
CATGCGGGTAC---
 A C G T T C G A A C G T C T A G T C A G C T A G A C T G A C T G C G T A A C G T A T G C A C G T A C G T A T C G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RTGVGGGATCTTG
-ANCAGGATGT--
 T C G A A C G T C T A G T C A G C T A G A C T G A C T G C G T A A C G T A T G C A C G T A C G T A T C G
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:RTGVGGGATCTTG----
--BCNGGTTCTAGANCN
 T C G A A C G T C T A G T C A G C T A G A C T G A C T G C G T A A C G T A T G C A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T