Information for 13-CGTTACACTC (Motif 37)

A G T C A C T G C G A T C G A T C G T A A G T C C G T A A G T C C G A T A G T C
Reverse Opposite:
C T A G C G T A A C T G A C G T A C T G A C G T C G T A G C T A A G T C A C T G
p-value:1e-5
log p-value:-1.226e+01
Information Content per bp:1.883
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.3 +/- 24.8bp
Average Position of motif in Background58.8 +/- 43.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGTTACACTC
NTTGATACATT-
 A C G T A C G T A G T C A C T G C G A T C G A T C G T A A G T C C G T A A G T C C G A T A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGTTACACTC--
--MRSCACTYAA
 A G T C A C T G C G A T C G A T C G T A A G T C C G T A A G T C C G A T A G T C A C G T A C G T
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGTTACACTC
KTTCACACCT
 A G T C A C T G C G A T C G A T C G T A A G T C C G T A A G T C C G A T A G T C
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

MYBL2/MA0777.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGTTACACTC--
AACCGTTAAACGGTC
 A C G T A C G T A C G T A G T C A C T G C G A T C G A T C G T A A G T C C G T A A G T C C G A T A G T C A C G T A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGTTACACTC--
--AASCACTCAA
 A G T C A C T G C G A T C G A T C G T A A G T C C G T A A G T C C G A T A G T C A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGTTACACTC
--TCACACCT
 A G T C A C T G C G A T C G A T C G T A A G T C C G T A A G T C C G A T A G T C
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGTTACACTC---
---RSCACTYRAG
 A G T C A C T G C G A T C G A T C G T A A G T C C G T A A G T C C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGTTACACTC
--TCACACCT
 A G T C A C T G C G A T C G A T C G T A A G T C C G T A A G T C C G A T A G T C
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGTTACACTC
--TCACACCT
 A G T C A C T G C G A T C G A T C G T A A G T C C G T A A G T C C G A T A G T C
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGTTACACTC---
----CCACTTGAA
 A G T C A C T G C G A T C G A T C G T A A G T C C G T A A G T C C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A