Information for 12-TCACKACCMT (Motif 36)

C G A T A G T C G T C A A G T C A C G T G T C A A G T C A G T C G T A C A C G T
Reverse Opposite:
C G T A C A T G C T A G A C T G A C G T G T C A A C T G A C G T T C A G C G T A
p-value:1e-5
log p-value:-1.243e+01
Information Content per bp:1.790
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif48.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets54.6 +/- 29.7bp
Average Position of motif in Background51.3 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0077.1_Hoxd12/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TCACKACCMT-
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C G T C A A G T C A C G T G T C A A G T C A G T C G T A C A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0066.1_Hoxc11/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TCACKACCMT-
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C G T C A A G T C A C G T G T C A A G T C A G T C G T A C A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0067.1_Hoxc12/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TCACKACCMT-
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C G T C A A G T C A C G T G T C A A G T C A G T C G T A C A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCACKACCMT
NTTTTACGACC--
 A C G T A C G T A C G T C G A T A G T C G T C A A G T C A C G T G T C A A G T C A G T C G T A C A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------TCACKACCMT-
ANNATTTTACGACNTNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C G T C A A G T C A C G T G T C A A G T C A G T C G T A C A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

PH0047.1_Hoxa11/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TCACKACCMT-
NNGTTTTACGACTTTA
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C G T C A A G T C A C G T G T C A A G T C A G T C G T A C A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TCACKACCMT-
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C G T C A A G T C A C G T G T C A A G T C A G T C G T A C A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

HOXC11/MA0651.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCACKACCMT
NTTTTACGACC--
 A C G T A C G T A C G T C G A T A G T C G T C A A G T C A C G T G T C A A G T C A G T C G T A C A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCACKACCMT
NTTTTACGACT--
 A C G T A C G T A C G T C G A T A G T C G T C A A G T C A C G T G T C A A G T C A G T C G T A C A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCACKACCMT
ANTTTTACGACC--
 A C G T A C G T A C G T A C G T C G A T A G T C G T C A A G T C A C G T G T C A A G T C A G T C G T A C A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T A C G T