Information for 9-WGGCCGTTCC (Motif 33)

C G A T A C T G C T A G A G T C A G T C A T C G A C G T A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G T G C A G T C A T A G C A C T G A C T G A G T C A G T C C G T A
p-value:1e-5
log p-value:-1.318e+01
Information Content per bp:1.771
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif391.4
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets56.8 +/- 27.1bp
Average Position of motif in Background50.2 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-WGGCCGTTCC---
CAGGCCNNGGCCNN
 A C G T C G A T A C T G C T A G A G T C A G T C A T C G A C G T A C G T A T G C A G T C A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:WGGCCGTTCC--
TGACCTTTNCNT
 C G A T A C T G C T A G A G T C A G T C A T C G A C G T A C G T A T G C A G T C A C G T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--WGGCCGTTCC
CTAGGCCT----
 A C G T A C G T C G A T A C T G C T A G A G T C A G T C A T C G A C G T A C G T A T G C A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:WGGCCGTTCC-
-TKCTGTTCCA
 C G A T A C T G C T A G A G T C A G T C A T C G A C G T A C G T A T G C A G T C A C G T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----WGGCCGTTCC--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C A G T C A T C G A C G T A C G T A T G C A G T C A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--WGGCCGTTCC
BNTGDCCTTG--
 A C G T A C G T C G A T A C T G C T A G A G T C A G T C A T C G A C G T A C G T A T G C A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-WGGCCGTTCC
CTGACCTTTG-
 A C G T C G A T A C T G C T A G A G T C A G T C A T C G A C G T A C G T A T G C A G T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:WGGCCGTTCC
-GGCVGTTR-
 C G A T A C T G C T A G A G T C A G T C A T C G A C G T A C G T A T G C A G T C
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----WGGCCGTTCC--
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C A G T C A T C G A C G T A C G T A T G C A G T C A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:WGGCCGTTCC----
TGACCTTTGCCCTA
 C G A T A C T G C T A G A G T C A G T C A T C G A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A