Information for 2-CCTTCTGCTBCAGTTT (Motif 3)

A G T C A G T C A G C T A C G T A G T C A C G T A C T G A T G C C G A T A G C T G T A C C G T A A T C G C G A T A G C T A G C T
Reverse Opposite:
C T G A C T G A C G T A A T G C C G A T A C T G T C G A C G T A A T C G A G T C C G T A A C T G G T C A C T G A A C T G A C T G
p-value:1e-14
log p-value:-3.257e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 25.9bp
Average Position of motif in Background39.1 +/- 9.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTTCTGCTBCAGTTT
GCCATCTGTT-------
 A C G T A G T C A G T C A G C T A C G T A G T C A C G T A C T G A T G C C G A T A G C T G T A C C G T A A T C G C G A T A G C T A G C T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCTTCTGCTBCAGTTT
ACCATCTGTT-------
 A C G T A G T C A G T C A G C T A C G T A G T C A C G T A C T G A T G C C G A T A G C T G T A C C G T A A T C G C G A T A G C T A G C T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCTTCTGCTBCAGTTT
RCCATMTGTT-------
 A C G T A G T C A G T C A G C T A C G T A G T C A C G T A C T G A T G C C G A T A G C T G T A C C G T A A T C G C G A T A G C T A G C T
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTTCTGCTBCAGTTT
CCTGCTGAGH------
 A G T C A G T C A G C T A C G T A G T C A C G T A C T G A T G C C G A T A G C T G T A C C G T A A T C G C G A T A G C T A G C T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTTCTGCTBCAGTTT
-CAGCTGNT-------
 A G T C A G T C A G C T A C G T A G T C A C G T A C T G A T G C C G A T A G C T G T A C C G T A A T C G C G A T A G C T A G C T
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCTGCTBCAGTTT
CCCCCTGCTGTG-------
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T A G T C A C G T A C T G A T G C C G A T A G C T G T A C C G T A A T C G C G A T A G C T A G C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCTTCTGCTBCAGTTT
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A G T C A C G T A C T G A T G C C G A T A G C T G T A C C G T A A T C G C G A T A G C T A G C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCTGCTBCAGTTT
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T A G T C A C G T A C T G A T G C C G A T A G C T G T A C C G T A A T C G C G A T A G C T A G C T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCTGCTBCAGTTT
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T A G T C A C G T A C T G A T G C C G A T A G C T G T A C C G T A A T C G C G A T A G C T A G C T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCTTCTGCTBCAGTTT
GCCAGCTGBTNB-----
 A C G T A G T C A G T C A G C T A C G T A G T C A C G T A C T G A T G C C G A T A G C T G T A C C G T A A T C G C G A T A G C T A G C T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T A C G T A C G T